MirGeneDB 3.0

6 Rattus norvegicus microRNA genes with seed AAAGUGC (all species)
Sort by genome coordinates Motifs Tissue expression
 +
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC Dr Dr Ad Bi Bi Bi Bi Br Br Br Br Ce Ce Ce Ce Co Co Co Co Du Du Du Du Fa He He He Hi Hi Il Il Je Je Ki Ki Ki Ki Ki La Li Li Li Li Li Li Lu Me Me Mu Ov Pa Pa Pa Sk Sm So So So So Sp St St St St Te Te Th Ut Wh
Rno-Mir-17-P1a rno-mir-17-1 MIR-17 AAAGUGC MIMAT0000786 MIMAT0004710 chr15 100179892 100179951 + Gnathostomata Vertebrata No 1
Rno-Mir-17-P1c rno-mir-17-2 MIR-17 AAAGUGC MIMAT0000786 MIMAT0017295 chrX 140117900 140117958 - Gnathostomata Vertebrata No 1
Rno-Mir-17-P1d rno-mir-106b MIR-17 AAAGUGC MIMAT0000825 MIMAT0004727 chr12 19307761 19307822 - Gnathostomata Vertebrata No 1 1
Rno-Mir-17-P4a rno-mir-20a MIR-17 AAAGUGC MIMAT0000602 MIMAT0000603 chr15 100180349 100180407 + Gnathostomata Vertebrata No 1 1
Rno-Mir-17-P4c rno-mir-20b MIR-17 AAAGUGC MIMAT0003211 MIMAT0003212 chrX 140117522 140117582 - Gnathostomata Vertebrata No
Rno-Mir-17-P4d rno-mir-93 MIR-17 AAAGUGC MIMAT0000817 MIMAT0017109 chr12 19307555 19307615 - Gnathostomata Vertebrata No 1

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all

Download genome coordinates (GFF format)

Download count matrix