MirGeneDB 3.0

12 Xenopus laevis microRNA genes of family MIR-130 (all species)
Sort by genome coordinates Motifs Tissue expression
 +
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC Eg Em Em He Ki Re St St
Xla-Mir-130-P1a3 xla-mir-130c-2 MIR-130 AGUGCAA MIMAT0046445 MIMAT0046446 NC_030724.1 153961037 153961095 - X. laevis Vertebrata No
Xla-Mir-130-P1a4 xla-mir-130c-1 MIR-130 AGUGCAA MIMAT0046445 MIMAT0046446 NC_030725.1 126921116 126921174 - X. laevis Vertebrata No
Xla-Mir-130-P1b3 xla-mir-130a MIR-130 AGUGCAA MIMAT0046441 MIMAT0046442 NC_030726.1 93401048 93401112 + X. laevis Vertebrata No 1 1
Xla-Mir-130-P1b4 None MIR-130 AGUGCAA None None NC_030727.1 78407994 78408057 + X. laevis Vertebrata No 1 1
Xla-Mir-130-P2a3 None MIR-130 AGUGCAA None None NC_030724.1 153960220 153960282 - X. laevis Vertebrata No 1 1
Xla-Mir-130-P2a4 None MIR-130 AGUGCAA None None NC_030725.1 126920251 126920313 - X. laevis Vertebrata No 1 1
Xla-Mir-130-P2b3 xla-mir-301-1 MIR-130 AGUGCAA MIMAT0046566 MIMAT0046567 NC_030726.1 93401257 93401319 + X. laevis Vertebrata Yes 1
Xla-Mir-130-P2b4 xla-mir-301-2 MIR-130 AGUGCAA MIMAT0046566 MIMAT0046567 NC_030726.1 93401258 93401319 + X. laevis Vertebrata Yes 1
Xla-Mir-130-P3a3 None MIR-130 AGUGCAA None None NC_030724.1 153953774 153953837 - X. laevis Vertebrata No
Xla-Mir-130-P3a4 None MIR-130 AGUGCAA None None NC_030725.1 126914978 126915041 - X. laevis Vertebrata No
Xla-Mir-130-P4a3 None MIR-130 AGUGCAA None None NC_030724.1 153951773 153951832 - X. laevis Vertebrata No 1 1
Xla-Mir-130-P4a4 xla-mir-130b MIR-130 AGUGCAA MIMAT0046443 MIMAT0046444 NC_030725.1 126913055 126913114 - X. laevis Vertebrata No 1 1

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all

Download genome coordinates (GFF format)

Download count matrix