MirGeneDB 3.0
MirGeneDB ID

Aca-Mir-1677-o1

Family name MIR-1677 (all species)
Seed GACUUCA
Species Green anole lizard (Anolis carolinensis)
MiRBase ID aca-mir-1677a
Paralogues Aca-Mir-1677-P7 
Orthologues Cli-Mir-1677-P1  Cpi-Mir-1677-P1a1  Cpi-Mir-1677-P1a2  Cpi-Mir-1677-P1b  Gga-Mir-1677-P1  Tgu-Mir-1677-P1 
Node of Origin (locus) A. carolinensis
Node of Origin (family) Diapsida
Genome context
(anoCar2)		 5: 15152952-15153008 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UAUACUUUUUAUUCUGGUAUAAAGUGUUAAUCCUCCCCUAUUGAAAUCAAUGGGAUGCCUGCCACUGACUUCAAUAGGAGUAGGAUGACACUAUAUGAUGUUAUAAAAUUUGUGAUU
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Structure
        10           20        30         40        50       
UAUACUUUUUAUUCUGG---|   A       A    CC-         A   AUGGGAU 
                    UAUA AGUGUUA UCCU   CCUAUUGAA UCA       G
                    GUAU UCACAGU AGGA   GGAUAACUU AGU       C
UUAGUGUUUAAAAUAUUGUA^   A       -    UGA         C   CACCGUC 
     110       100        90         80        70        60
Deep sequencing
3' NTU Unknown
MotifsNo
Tissue expression
-   +
Sk Ta Ta To Wh
Star sequence

Aca-Mir-1677-o1_5p* (predicted)
mirBase accessionNone
Sequence 
0- UCCUCCCCUAUUGAAAUCAAU -21
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Mature sequence

Aca-Mir-1677-o1_3p (predicted)
mirBase accessionMIMAT0021796
Sequence 
35- UGACUUCAAUAGGAGUAGGAUG -57
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