MirGeneDB 3.0
MirGeneDB ID

Gga-Mir-1677-P1

Family name MIR-1677 (all species)
Seed UGACUUC
Species Chicken (Gallus gallus)
MiRBase ID gga-mir-1677
Paralogues Gga-Mir-1677-P2  Gga-Mir-1677-P3  Gga-Mir-1677-P4  Gga-Mir-1677-P5  Gga-Mir-1677-P6 
Orthologues Aca-Mir-1677-o1  Cli-Mir-1677-P1  Cpi-Mir-1677-P1a1  Cpi-Mir-1677-P1a2  Cpi-Mir-1677-P1b  Tgu-Mir-1677-P1 
Node of Origin (locus) Archelosauria
Node of Origin (family) Diapsida
Genome context
(Gallus_gallus.GRCg6a)		 3: 73971343-73971399 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAGAUAUUAGCUGUGUUGCUUAGGGUCUGAUCCUGCACCGCUGAAGUCAAUGGAAGUUUUGUCAUUGACUUCAGUAGGAGCAGGAUUUGAACCUCAUGCUCUUUCAGAACACACAGG
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Structure
        10         20         30         40        50       
CAGAUAUUAGCUGUGUU-  UU-   G  U        A  -|            GAAG 
                  GC   AGG UC GAUCCUGC CC GCUGAAGUCAAUG    U
                  CG   UCC AG UUAGGACG GG UGACUUCAGUUAC    U
GGACACACAAGACUUUCU  UAC   A  U        A  A^            UGUU 
     110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
-   +
Ad Ad Ad Br Br Ce Ce Ce Ce Gg He He Hy Hy Ki Ki Li Li Lu Lu Ov Pr Pr Sc Sc Sp Sp Te
Star sequence

Gga-Mir-1677-P1_5p*
mirBase accessionMIMAT0007562
Sequence 
0- UCCUGCACCGCUGAAGUCAAUG -22
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Proposed targets TargetScanVert: gga-miR-1677-5p
miRDB: MIMAT0007562
Mature sequence

Gga-Mir-1677-P1_3p
mirBase accessionMIMAT0007563
Sequence 
34- UUGACUUCAGUAGGAGCAGGAUU -57
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Proposed targets TargetScanVert: gga-miR-1677-3p
miRDB: MIMAT0007563