MirGeneDB 3.0
MirGeneDB ID

Tgu-Mir-1677-P1

Family name MIR-1677 (all species)
Seed UGACUUC
Species Zebra finch (Taeniopygia guttata)
MiRBase ID tgu-mir-1677
Paralogues Tgu-Mir-1677-P2  Tgu-Mir-1677-P4  Tgu-Mir-1677-P5  Tgu-Mir-1677-P6 
Orthologues Aca-Mir-1677-o1  Cli-Mir-1677-P1  Cpi-Mir-1677-P1a1  Cpi-Mir-1677-P1a2  Cpi-Mir-1677-P1b  Gga-Mir-1677-P1 
Node of Origin (locus) Archelosauria
Node of Origin (family) Diapsida
Genome context
(TaeGut1_add)		 3: 38376375-38376431 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAGAUGAUAGCUGUGUUGCUUAGGGUCUGAUCCUGCACCGCUGAAGUCAAUGGAAGCUUUGUCAUUGACUUCAAUAGGAGCAGGAUUUGAACCUUAUGCUCUAUCAGAACACACAGG
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Structure
        10         20         30        40         50       
CAGAUGAUAGCUGUGUU-  U     -  U        A  GC-|          GAAG 
                  GC UAGGG UC GAUCCUGC CC   UGAAGUCAAUG    C
                  CG AUUCC AG UUAGGACG GG   ACUUCAGUUAC    U
GGACACACAAGACUAUCU  U     A  U        A  AUA^          UGUU 
     110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
-   +
Fe Fe Fe Fe Ma Ma Ma Ma
Star sequence

Tgu-Mir-1677-P1_5p*
mirBase accessionMIMAT0014452
Sequence 
0- UCCUGCACCGCUGAAGUCAAUG -22
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Mature sequence

Tgu-Mir-1677-P1_3p
mirBase accessionMIMAT0026959
Sequence 
34- UUGACUUCAAUAGGAGCAGGAUU -57
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