MirGeneDB 3.0
MirGeneDB ID

Gga-Mir-1677-P2

Family name MIR-1677 (all species)
Seed CUUUAAU
Species Chicken (Gallus gallus)
MiRBase ID gga-mir-1620
Paralogues Gga-Mir-1677-P1  Gga-Mir-1677-P3  Gga-Mir-1677-P4  Gga-Mir-1677-P5  Gga-Mir-1677-P6 
Orthologues Cli-Mir-1677-P2  Cpi-Mir-1677-P2  Tgu-Mir-1677-P2 
Node of Origin (locus) Archelosauria
Node of Origin (family) Diapsida
Genome context
(Gallus_gallus.GRCg6a)		 8: 18847863-18847924 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAACUGCCUUCUGAUAUGCAAUAUGGGCUUGAUCCAAAGCCUGUUUAAGUCAGUGGACUGAUUCCCAAUGACUUUAAUGGGCUUUGGAUCACACCCUAAUUGCACUGAUGUUCCCUUUACUA
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Structure
        10          20        30        40        50        60
GAACUGCCUUCUGAUAU--|    AU   CU                U      GUGGACU 
                   GCAAU  GGG  UGAUCCAAAGCCUGUU AAGUCA       G
                   CGUUA  CCC  ACUAGGUUUCGGGUAA UUCAGU       A
AUCAUUUCCCUUGUAGUCA^    AU   AC                U      AACCCUU 
120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), UGUG in loop
Tissue expression
-   +
Ad Ad Ad Br Br Ce Ce Ce Ce Gg He He Hy Hy Ki Ki Li Li Lu Lu Ov Pr Pr Sc Sc Sp Sp Te
Star sequence

Gga-Mir-1677-P2_5p* (predicted)
mirBase accessionNone
Sequence 
0- GAUCCAAAGCCUGUUUAAGUCA -22
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Mature sequence

Gga-Mir-1677-P2_3p
mirBase accessionMIMAT0007487
Sequence 
40- ACUUUAAUGGGCUUUGGAUCAC -62
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Proposed targets TargetScanVert: gga-miR-1620
miRDB: MIMAT0007487