| MirGeneDB ID | Agr-Mir-92-o113 |
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| Family name |
MIR-92 (all species) |
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| Seed |
AUUGCAC |
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| Species |
West Indian fuzzy chiton (Acanthopleura granulata ) |
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| MiRBase ID |
|
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| Paralogues |
Agr-Mir-92-o109
Agr-Mir-92-o110
Agr-Mir-92-o111
Agr-Mir-92-o112
|
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| Orthologues |
Asu-Mir-92
Cel-Mir-92
Esc-Mir-92
Gsp-Mir-92
Hmi-Mir-92
Isc-Mir-92
Obi-Mir-92
Sme-Mir-92
|
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| Node of Origin (locus) |
A. granulata
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| Node of Origin (family) |
Bilateria
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Genome context
(GCA_016165875.1_ASM1616587v1_Acanthopleura_granula) |
JABBOT010000006.1: 4001698-4001754 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GCUGAUGAUCGGGAGUAAUCGUUGAUGCUUAGGUCGUGACGGCUGCAAUAUUGUAUACCCAAUCAAAUUGCACUUGUCCCGGCCUGCUCAGCUACGAUUGGGCAGCAGUUACCAGGG
Get precursor sequence
|
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| Structure | 10 20 30 40 50
GCUGAUGAUCGGGAGUA--| UGA CU U C A UAUA
AUCGU UG UAGGUCG GACGG UGCAAU UUG C
UAGCA AC GUCCGGC CUGUU ACGUUA AAC C
GGGACCAUUGACGACGGGU^ UCG UC C C - UAAC
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| Comment | It is not clear either from phylogenetic or syntenic information how many Mir-92 genes were present in the last common ancestor of bilaterians and how the vertebrate Mir-92s relate to the invertebrate Mir-92s and thus these multiple paralogues in invertebrates are classified here as orphans pending additional data. |
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
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| Star sequence |
Agr-Mir-92-o113_5p* (predicted) |
| mirBase accession | None |
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| Sequence |
0- AGGUCGUGACGGCUGCAAUAUUG -23
Get sequence
|
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| Mature sequence |
Agr-Mir-92-o113_3p |
| mirBase accession | None |
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| Sequence |
35- AAUUGCACUUGUCCCGGCCUGC -57
Get sequence
|
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