MirGeneDB 3.0
MirGeneDB ID

Ava-Mir-219-P14

Family name MIR-219 (all species)
Seed GAUUGUC
Species Bdelloid rotifer (Adineta vaga)
MiRBase ID
Paralogues Ava-Mir-219-P13 
Orthologues Aae-Mir-219  Aga-Mir-219  Agr-Mir-219  Bfl-Mir-219  Bge-Mir-219  Bko-Mir-219  Bla-Mir-219  Bpl-Mir-219  Cin-Mir-219  Csc-Mir-219  Cte-Mir-219  Dan-Mir-219  Dgr-Mir-219  Dlo-Mir-219  Dma-Mir-219  Dme-Mir-219  Dmo-Mir-219  Dpu-Mir-219  Dsi-Mir-219  Dya-Mir-219  Eba-Mir-219  Egr-Mir-219  Esc-Mir-219  Gpa-Mir-219  Gsa-Mir-219  Gsp-Mir-219  Hmi-Mir-219  Hru-Mir-219  Isc-Mir-219  Lan-Mir-219  Llo-Mir-219  Mgi-Mir-219  Mom-Mir-219  Obi-Mir-219  Ofu-Mir-219  Ovu-Mir-219  Pau-Mir-219  Pca-Mir-219  Pcr-Mir-219  Pdu-Mir-219-P14a  Pdu-Mir-219-P14b  Pfl-Mir-219  Pmi-Mir-219  Pve-Mir-219  Rph-Mir-219  Sko-Mir-219  Sma-Mir-219  Sne-Mir-219  Snu-Mir-219  Spu-Mir-219  Sro-Mir-219  Tca-Mir-219  Tur-Mir-219  War-Mir-219  Xbo-Mir-219 
Node of Origin (locus) A. vaga
Node of Origin (family) Bilateria
Genome context
(GCA_021613535.1_ASM2161353v1_AVA)		 CP075497.1: 11168837-11168898 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
GAAAAAAAUAAAUUUUGCUCAAAGAUCGAUUGAUUGUCUAUACGCAUUUCGUUUUGAAUGAUAAAUUAACGAAAAUCCUAUAGAUAUAUCAUUGAUUAAAAGUUUUUCGUCUUUAUUUAACA
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Structure
        10        20          30         40        50        60
GAAAAAAAUAAAUUUUGCUCAAA--|      U   -        CGCA       UUGAAU 
                         GAUCGAU GAU UGUCUAUA    UUUCGUU      G
                         UUAGUUA CUA AUAGAUAU    AAAGCAA      A
ACAAUUUAUUUCUGCUUUUUGAAAA^      -   U        CCUA       UUAAAU 
120       110       100         90        80        70
Deep sequencing
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CommentThe MIR-219 family shows substantial variation of arm-usage and is currently, across all species, considered a co-mature.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
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Mature sequence

Ava-Mir-219-P14_5p
mirBase accessionNone
Sequence 
0- UGAUUGUCUAUACGCAUUUCGUU -23
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Co-mature sequence

Ava-Mir-219-P14_3p
mirBase accessionNone
Sequence 
39- CGAAAAUCCUAUAGAUAUAUCAU -62
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