Mir-281-P24a

MirGeneDB ID

Ava-Mir-281-P24a

Family name

MIR-281 (all species)

Seed

UGUCAUG

Species

Bdelloid rotifer (Adineta vaga)

MiRBase ID

Paralogues

Ava-Mir-281-P24b Ava-Mir-281-P25a Ava-Mir-281-P25b

Orthologues

Aae-Mir-281 Aga-Mir-281 Agr-Mir-281 Asu-Mir-281 Bfl-Mir-281 Bge-Mir-281 Bko-Mir-281 Bla-Mir-281 Bpl-Mir-281 Cin-Mir-281 Csc-Mir-281 Cte-Mir-281 Dgr-Mir-281 Dlo-Mir-281 Dma-Mir-281 Dpu-Mir-281 Eba-Mir-281 Ebu-Mir-281 Egr-Mir-281 Esc-Mir-281 Gsa-Mir-281 Hme-Mir-281 Hru-Mir-281 Isc-Mir-281 Lhy-Mir-281 Llo-Mir-281 Mgi-Mir-281 Mom-Mir-281 Npo-Mir-281 Obi-Mir-281 Ofu-Mir-281 Ovu-Mir-281 Pca-Mir-281 Pcr-Mir-281 Pdu-Mir-281 Pfl-Mir-281 Rph-Mir-281 Sko-Mir-281 Sma-Mir-281 Sme-Mir-281 Snu-Mir-281 Sto-Mir-281 Tca-Mir-281 Tur-Mir-281 War-Mir-281

Node of Origin (locus)

A. vaga

Node of Origin (family)

Nephrozoa

Genome context
(GCA_021613535.1_ASM2161353v1_AVA)

CP075497.1: 5448016-5448080 [-] Ensembl

Precursor
(pre-Mir +30nt flank)

UAUACAAUGAAAGGUUUUCUAAAGUAAAGGAGAGAGCUCUUCUUGAUAAUUAGAACAGAUAUAAUAGACAAAUUGUCAUGGGGAUUGCUCUCUUCUUUCUUCUUUCAAUAUCGUCGAUGUUUAGU

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Structure

        10        20           30          40        50        60 
UAUACAAUGAAAGGUUUUCUA---   U            --|    U        AGAACAGAU 
                        AAG AAAGGAGAGAGC  UCUUC UGAUAAUU         \
                        UUC UUUCUUCUCUCG  AGGGG ACUGUUAA         A
UGAUUUGUAGCUGCUAUAACUUUC   -            UU^    U        ACAGAUAAU 
   120       110       100         90        80        70

Deep sequencing

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3' NTU

Motifs

CNNC at 3p(+17)

Tissue expression

To	To

Star sequence

Ava-Mir-281-P24a_5p*

mirBase accession

None

Sequence

0- AGAGAGCUCUUCUUGAUAAUU -21

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Mature sequence

Ava-Mir-281-P24a_3p

mirBase accession

None

Sequence

42- UUGUCAUGGGGAUUGCUCUCUUC -65

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