MirGeneDB 3.0
MirGeneDB ID

Bfl-Mir-103-P5

Family name MIR-103 (all species)
Seed GCAGCAU
Species Florida lancelet (Branchiostoma floridae)
MiRBase ID bfl-mir-2013
Paralogues Bfl-Mir-103-P6  Bfl-Mir-103-P7  Bfl-Mir-103-P8 
Orthologues Bla-Mir-103-P5  Hmi-Mir-103  Pfl-Mir-103  Pmi-Mir-103  Sko-Mir-103  Spu-Mir-103  Sro-Mir-103  Xbo-Mir-103 
Node of Origin (locus) Branchiostoma
Node of Origin (family) Bilateria
Genome context
(GCF_000003815.2_Bfl_VNyyK_genomic)		 NC_049987.1: 7512038-7512104 [-] UCSC
Clustered miRNAs
(< 50kb from Mir-103-P5)		 Mir-103-P6 NC_049987.1: 7507428-7507486 [-] UCSC
Mir-103-P5 NC_049987.1: 7512038-7512104 [-] UCSC
Precursor
(pre-Mir +30nt flank)
GUGUGUGUGUGGUGGAUGGUUUUGCCCCUGAGCCAUUGCAUUUGUCUGCCUUGUCUGUGCAUUGAGAUGUCCAAAGCAGCAUAGUGCAAUGGUGUCAGGGUCAGGACUGAAGUCUGCGAGUUCAAAC
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Structure
        10          20        30         40         50        60  
GUGUGUGUGUGGUGGAU--       C      -           -| U    C  GUCUGUGCA 
                   GGUUUUG CCCUGA GCCAUUGCAUU UG CUGC UU         U
                   UCAGGAC GGGACU UGGUAACGUGA AC GACG AA         U
CAAACUUGAGCGUCUGAAG       U      G           U^ -    A  CCUGUAGAG 
     120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Bfl-Mir-103-P5_5p*
mirBase accessionNone
Sequence 
0- AGCCAUUGCAUUUGUCUGCCUU -22
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Mature sequence

Bfl-Mir-103-P5_3p
mirBase accessionMIMAT0009991
Sequence 
44- AGCAGCAUAGUGCAAUGGUGUCA -67
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