MirGeneDB 3.0
MirGeneDB ID

Bfl-Mir-103-P7

Family name MIR-103 (all species)
Seed AGCAGCA
Species Florida lancelet (Branchiostoma floridae)
MiRBase ID bfl-mir-2066
Paralogues Bfl-Mir-103-P5  Bfl-Mir-103-P6  Bfl-Mir-103-P8 
Orthologues Bla-Mir-103-P7  Hmi-Mir-103  Pfl-Mir-103  Pmi-Mir-103  Sko-Mir-103  Spu-Mir-103  Sro-Mir-103  Xbo-Mir-103 
Node of Origin (locus) Branchiostoma
Node of Origin (family) Bilateria
Genome context
(GCF_000003815.2_Bfl_VNyyK_genomic)		 NC_049980.1: 23514642-23514701 [+] UCSC
Clustered miRNAs
(< 50kb from Mir-103-P7)		 Mir-103-P7 NC_049980.1: 23514642-23514701 [+] UCSC
Mir-103-P8 NC_049980.1: 23517098-23517157 [+] UCSC
Precursor
(pre-Mir +30nt flank)
AGGAGGAAGCGGCUGGUGCCAGCGCCCCUGACUGCUGCAUCCUGCUGCCUUGGGGAAUAUCAACCACCAAGCAGCAGUGUGCAGUGGUGAGGGUGGUAUGGCCACAACUACAAACACCAG
Get precursor sequence
Structure
        10         20         30        40        50          
AGGAGGAAGCGGCUGGU-    -| GC    G  UG     UC       C    GGAAUA 
                  GCCA GC  CCCU AC  CUGCA  CUGCUGC UUGG      \
                  CGGU UG  GGGA UG  GACGU  GACGACG AACC      U
GACCACAAACAUCAACAC    A^ GU    G  GU     GU       -    ACCAAC 
.       110       100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Bfl-Mir-103-P7_5p*
mirBase accessionNone
Sequence 
0- ACUGCUGCAUCCUGCUGCCUUGG -23
Get sequence
Mature sequence

Bfl-Mir-103-P7_3p
mirBase accessionMIMAT0009994
Sequence 
38- AAGCAGCAGUGUGCAGUGGUGA -60
Get sequence