MirGeneDB 3.0
MirGeneDB ID

Bge-Mir-279-o5

Family name MIR-279 (all species)
Seed ACGGAUG
Species Cockroach (Blattella germanica)
MiRBase ID
Paralogues Bge-Mir-279-o6  Bge-Mir-279-o7  Bge-Mir-279-P2  Bge-Mir-279-P3 
Orthologues Agr-Mir-279  Bpl-Mir-279  Eba-Mir-279  Egr-Mir-279  Esc-Mir-279  Gsa-Mir-279  Gsp-Mir-279  Hru-Mir-279  Isc-Mir-279  Lgi-Mir-279  Lhy-Mir-279  Llo-Mir-279  Lpo-Mir-279-P5  Mgi-Mir-279  Mom-Mir-279  Npo-Mir-279  Obi-Mir-279  Ovu-Mir-279  Pau-Mir-279  Pcr-Mir-279  Pve-Mir-279  Rph-Mir-279  Sma-Mir-279  Sne-Mir-279 
Node of Origin (locus) B. germanica
Node of Origin (family) Protostomia
Genome context
(Bger_2.0)		 KZ614498.1: 736091-736150 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AGAAAGACAUCAUGUGGGACUACCUCAGGUGACGGAUGUUGCUCUGGUGCACGUUAUAUGAAUAGUCGUGACUAGAGUGACACUCGUCGACUGAGGAAGUCAUUUUCAUCUGUGGUUAAA
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Structure
        10          20        30        40        50          
AGAAAGACAUCAUGUGG--|   A      G     GA   UG       G    UUAUAU 
                   GACU CCUCAG UGACG  UGU  CUCUGGU CACG      \
                   CUGA GGAGUC GCUGC  ACA  GAGAUCA GUGC      G
AAAUUGGUGUCUACUUUUA^   A      A     UC   GU       -    UGAUAA 
.       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ad Ad Co Co Di Di Eg Eg Em Em Em Em Em Em Em Em Em Em Ny Ny Ny Ny Ny Ny Ny Ny Ov
Mature sequence

Bge-Mir-279-o5_5p
mirBase accessionNone
Sequence 
0- GACGGAUGUUGCUCUGGUGCACG -23
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Co-mature sequence

Bge-Mir-279-o5_3p
mirBase accessionNone
Sequence 
38- UGACUAGAGUGACACUCGUCGA -60
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