MirGeneDB 3.0
MirGeneDB ID

Bge-Mir-279-o7

Family name MIR-279 (all species)
Seed GACUAGA
Species Cockroach (Blattella germanica)
MiRBase ID
Paralogues Bge-Mir-279-o5  Bge-Mir-279-o6  Bge-Mir-279-P2  Bge-Mir-279-P3 
Orthologues Agr-Mir-279  Bpl-Mir-279  Eba-Mir-279  Egr-Mir-279  Esc-Mir-279  Gsa-Mir-279  Gsp-Mir-279  Hru-Mir-279  Isc-Mir-279  Lgi-Mir-279  Lhy-Mir-279  Llo-Mir-279  Lpo-Mir-279-P7  Mgi-Mir-279  Mom-Mir-279  Npo-Mir-279  Obi-Mir-279  Ovu-Mir-279  Pau-Mir-279  Pcr-Mir-279  Pve-Mir-279  Rph-Mir-279  Sma-Mir-279  Sne-Mir-279 
Node of Origin (locus) B. germanica
Node of Origin (family) Protostomia
Genome context
(Bger_2.0)		 KZ615200.1: 181846-181905 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AUCUAGUUGGCAGUGAUACUUCUUGUGGUGGAUGGGUGUAUCUCUAGUGCAUGUUUUUUUAUAUCUCAUGACUAGAUUUUCACUCGUUCAUCAAGAGAUUUAAAUCGGCAACCACUUCAU
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Structure
        10        20          30        40        50          
AUCUAGUUGGCAGUGAUACU--|   G             UAUC      G    UUUUUU 
                      UCUU UGGUGGAUGGGUG    UCUAGU CAUG      \
                      AGAG ACUACUUGCUCAC    AGAUCA GUAC      U
UACUUCACCAACGGCUAAAUUU^   A             UUUU      -    UCUAUA 
.       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ad Ad Co Co Di Di Eg Eg Em Em Em Em Em Em Em Em Em Em Ny Ny Ny Ny Ny Ny Ny Ny Ov
Star sequence

Bge-Mir-279-o7_5p*
mirBase accessionNone
Sequence 
0- GAUGGGUGUAUCUCUAGUGCAUG -23
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Mature sequence

Bge-Mir-279-o7_3p
mirBase accessionNone
Sequence 
38- UGACUAGAUUUUCACUCGUUCA -60
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