MirGeneDB 3.0
MirGeneDB ID

Bko-Mir-12598-P1d

Family name MIR-12598 (all species)
Seed ACUGUUU
Species Monogonont Rotifer 2 (Brachionus koreanus)
MiRBase ID
Paralogues Bko-Mir-12598-P1c  Bko-Mir-12598-P2c  Bko-Mir-12598-P2d  Bko-Mir-12598-P3c  Bko-Mir-12598-P3d 
Orthologues
Node of Origin (locus) B. koreanus
Node of Origin (family) Rotifera
Genome context
(Brachionus_koreanusGCA_016987375.1_Bk_v0.5.4_genom)		 PJRA01000016.1: 494495-494558 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UAGAUAUCAAUAUGUCAUGUCACGAAAAAGAACUGUUUAUAAAUAGCCUCGCUUGUAAAUGAUGCCUAAUGCGAGGGUAUUUUUAAGCAGUAAUCGUUCGGGCACAAAAACAACAAUUUCAAAU
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Structure
        10           20        30        40        50        60 
UAGAUAUCAAUAUGUCA---|   A    AAAGA        U     G      UUGUAAAU 
                    UGUC CGAA     ACUGUUUA AAAUA CCUCGC        G
                    ACGG GCUU     UGACGAAU UUUAU GGAGCG        A
UAAACUUUAACAACAAAAAC^   -    GCUAA        U     G      UAAUCCGU 
  120       110        100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
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Mature sequence

Bko-Mir-12598-P1d_5p
mirBase accessionNone
Sequence 
0- AACUGUUUAUAAAUAGCCUCGC -22
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Star sequence

Bko-Mir-12598-P1d_3p*
mirBase accessionNone
Sequence 
42- GAGGGUAUUUUUAAGCAGUAAU -64
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