MirGeneDB 3.0
MirGeneDB ID

Bla-Mir-193-P1f1

Family name MIR-193 (all species)
Seed GGGACUU
Species European lancelet (Branchiostoma lanceolatum)
MiRBase ID
Paralogues Bla-Mir-193-P1e  Bla-Mir-193-P1f2  Bla-Mir-193-P1g1  Bla-Mir-193-P1g2  Bla-Mir-193-P1h1  Bla-Mir-193-P1h2  Bla-Mir-193-P1i1  Bla-Mir-193-P1i2  Bla-Mir-193-P1j1  Bla-Mir-193-P1j2  Bla-Mir-193-P1k 
Orthologues Aae-Mir-193-P1  Aga-Mir-193-P1  Bge-Mir-193-P1  Cbr-Mir-193-P1-v1  Cbr-Mir-193-P1-v2  Cel-Mir-193-P1-v1  Cel-Mir-193-P1-v2  Cte-Mir-193-P1  Dan-Mir-193-P1-v1  Dan-Mir-193-P1-v2  Dan-Mir-193-P1-v3  Dan-Mir-193-P1-v4  Dgr-Mir-193-P1  Dlo-Mir-193-P1  Dma-Mir-193-P1  Dme-Mir-193-P1-v1  Dme-Mir-193-P1-v2  Dme-Mir-193-P1-v3  Dme-Mir-193-P1-v4  Dmo-Mir-193-P1-v1  Dmo-Mir-193-P1-v2  Dmo-Mir-193-P1-v3  Dmo-Mir-193-P1-v4  Dpu-Mir-193-P1  Dsi-Mir-193-P1-v1  Dsi-Mir-193-P1-v2  Dsi-Mir-193-P1-v3  Dsi-Mir-193-P1-v4  Dya-Mir-193-P1-v1  Dya-Mir-193-P1-v2  Dya-Mir-193-P1-v3  Dya-Mir-193-P1-v4  Eba-Mir-193-P1  Esc-Mir-193-P1  Gpa-Mir-193-P1  Hme-Mir-193-P1  Hru-Mir-193-P1  Isc-Mir-193-P1  Lgi-Mir-193-P1  Lhy-Mir-193-P1  Mgi-Mir-193-P1  Mom-Mir-193-P1  Npo-Mir-193-P1  Obi-Mir-193-P1  Ofu-Mir-193-P1  Ovu-Mir-193-P1  Pau-Mir-193-P1  Pcr-Mir-193-P1  Pma-Mir-193-P1  Pmi-Mir-193-P1  Pve-Mir-193-P1  Rph-Mir-193-P1  Snu-Mir-193-P1  Tca-Mir-193-P1  War-Mir-193-P1  Xbo-Mir-193-P1 
Node of Origin (locus) B. lanceolatum
Node of Origin (family) Bilateria
Genome context
(BraLan2)		 Sc0000154: 659346-659404 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
ACGGCCGGUACCAUGCCCACUGUAACCGACCGGGACUUCGCGGGACAGACGGUUCAAUUUUGUAUCCUACUGGCUCUCUAAGUCCUGAUCGACUGCGGUGACUUGUCGGAGCCGUGUAC
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Structure
        10          20        30        40        50         
ACGGCCGGUACCAUGCC--|      AC   C        CGC   A   AC  UUCAAU 
                   CACUGUA  CGA CGGGACUU   GGG CAG  GG      \
                   GUGGCGU  GCU GUCCUGAA   CUC GUC  CC      U
CAUGUGCCGAGGCUGUUCA^      CA   A        UCU   G   AU  UAUGUU 
       110       100        90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
-   +
Ad Ad Em Em Em Em
Mature sequence

Bla-Mir-193-P1f1_5p
mirBase accessionNone
Sequence 
0- CGGGACUUCGCGGGACAGACGG -22
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Star sequence

Bla-Mir-193-P1f1_3p*
mirBase accessionNone
Sequence 
37- UACUGGCUCUCUAAGUCCUGAU -59
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