MirGeneDB 3.0
MirGeneDB ID

Bla-Mir-193-P1k

Family name MIR-193 (all species)
Seed ACUGGCC
Species European lancelet (Branchiostoma lanceolatum)
MiRBase ID
Paralogues Bla-Mir-193-P1e  Bla-Mir-193-P1f1  Bla-Mir-193-P1f2  Bla-Mir-193-P1g1  Bla-Mir-193-P1g2  Bla-Mir-193-P1h1  Bla-Mir-193-P1h2  Bla-Mir-193-P1i1  Bla-Mir-193-P1i2  Bla-Mir-193-P1j1  Bla-Mir-193-P1j2 
Orthologues Aae-Mir-193-P1  Aga-Mir-193-P1  Bfl-Mir-193-P1k  Bge-Mir-193-P1  Cbr-Mir-193-P1-v1  Cbr-Mir-193-P1-v2  Cel-Mir-193-P1-v1  Cel-Mir-193-P1-v2  Cte-Mir-193-P1  Dan-Mir-193-P1-v1  Dan-Mir-193-P1-v2  Dan-Mir-193-P1-v3  Dan-Mir-193-P1-v4  Dgr-Mir-193-P1  Dlo-Mir-193-P1  Dma-Mir-193-P1  Dme-Mir-193-P1-v1  Dme-Mir-193-P1-v2  Dme-Mir-193-P1-v3  Dme-Mir-193-P1-v4  Dmo-Mir-193-P1-v1  Dmo-Mir-193-P1-v2  Dmo-Mir-193-P1-v3  Dmo-Mir-193-P1-v4  Dpu-Mir-193-P1  Dsi-Mir-193-P1-v1  Dsi-Mir-193-P1-v2  Dsi-Mir-193-P1-v3  Dsi-Mir-193-P1-v4  Dya-Mir-193-P1-v1  Dya-Mir-193-P1-v2  Dya-Mir-193-P1-v3  Dya-Mir-193-P1-v4  Eba-Mir-193-P1  Esc-Mir-193-P1  Gpa-Mir-193-P1  Hme-Mir-193-P1  Hru-Mir-193-P1  Isc-Mir-193-P1  Lgi-Mir-193-P1  Lhy-Mir-193-P1  Mgi-Mir-193-P1  Mom-Mir-193-P1  Npo-Mir-193-P1  Obi-Mir-193-P1  Ofu-Mir-193-P1  Ovu-Mir-193-P1  Pau-Mir-193-P1  Pcr-Mir-193-P1  Pma-Mir-193-P1  Pmi-Mir-193-P1  Pve-Mir-193-P1  Rph-Mir-193-P1  Snu-Mir-193-P1  Tca-Mir-193-P1  War-Mir-193-P1  Xbo-Mir-193-P1 
Node of Origin (locus) Branchiostoma
Node of Origin (family) Bilateria
Genome context
(BraLan2)		 Sc0000154: 665556-665614 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
GUCGGGUAAAGUACAUGCUCACUUGUGAACAGCGGCUUGCGGGUCCAGUCGGUAGAAAGAGAUUUCCUACUGGCCUGCCAAGUCGGUGCUCACAUGAGCAGCUCGCAUCCAUAUACAUG
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Structure
        10            20        30         40        50         
GUCGGGUAAAGUACAUG----|   CU     A  G       -    U     C  UAGAAA 
                     CUCA  UGUGA CA CGGCUUG CGGG CCAGU GG      \
                     GAGU  ACACU GU GCUGAAC GUCC GGUCA CC      G
GUACAUAUACCUACGCUCGAC^   --     C  G       C    -     U  UUUAGA 
       110       100          90        80         70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
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Star sequence

Bla-Mir-193-P1k_5p*
mirBase accessionNone
Sequence 
0- AGCGGCUUGCGGGUCCAGUCGG -22
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Mature sequence

Bla-Mir-193-P1k_3p
mirBase accessionNone
Sequence 
37- UACUGGCCUGCCAAGUCGGUGC -59
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