MirGeneDB 3.0
MirGeneDB ID

Bta-Mir-1251

Family name MIR-1251 (all species)
Seed CUCUAGC
Species Cow (Bos taurus)
MiRBase ID bta-mir-1251
Paralogues
Orthologues Cfa-Mir-1251  Cja-Mir-1251  Cpo-Mir-1251  Dno-Mir-1251  Eca-Mir-1251  Ete-Mir-1251  Hsa-Mir-1251  Laf-Mir-1251  Mdo-Mir-1251  Mml-Mir-1251  Mmr-Mir-1251  Mmu-Mir-1251  Neu-Mir-1251  Ocu-Mir-1251  Pab-Mir-1251  Rno-Mir-1251  Sha-Mir-1251 
Node of Origin (locus) Theria
Node of Origin (family) Theria
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)		 NC_037332.1: 61701397-61701455 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CACCCGAGCCUCCAUGGAUCAGCUAUGUGGACUCUAGCUGCCAAAGGCGCUUCUCCUUCUGAACCGAGCGCUUUGCUCAGCCAGUGUAGACAUGGCCUGAUAAACAAUGGAACUUCUCC
Get precursor sequence
Structure
        10         20         30        40        50         
CACCCGAGCCUCCAUGG-    -|      GG  U  A    CCA        UCUCCUU 
                  AUCA GCUAUGU  AC CU GCUG   AAGGCGCU       \
                  UAGU CGGUACA  UG GA CGAC   UUUCGCGA       C
CCUCUUCAAGGUAACAAA    C^      GA  U  C    UCG        GCCAAGU 
       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsNo
Tissue expression
-   +
Ad Bo Br Ce Co Co De Fe He Hy Ir Ki La Lo Mi No Op Or Pe Re Su Te
Mature sequence

Bta-Mir-1251_5p
mirBase accessionMIMAT0009963
Sequence 
0- ACUCUAGCUGCCAAAGGCGCU -21
Get sequence
Proposed targets TargetScanVert: bta-miR-1251
Star sequence

Bta-Mir-1251_3p*
mirBase accessionNone
Sequence 
38- CGCUUUGCUCAGCCAGUGUAG -59
Get sequence