MirGeneDB ID | Mml-Mir-1251 |
Family name |
MIR-1251 (all species) |
Seed |
CUCUAGC |
Species |
Rhesus monkey (Macaca mulatta) |
MiRBase ID |
mml-mir-1251
|
Paralogues |
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Orthologues |
Bta-Mir-1251
Cfa-Mir-1251
Cja-Mir-1251
Cpo-Mir-1251
Dno-Mir-1251
Eca-Mir-1251
Ete-Mir-1251
Hsa-Mir-1251
Laf-Mir-1251
Mdo-Mir-1251
Mmr-Mir-1251
Mmu-Mir-1251
Neu-Mir-1251
Ocu-Mir-1251
Pab-Mir-1251
Rno-Mir-1251
Sha-Mir-1251
|
Node of Origin (locus) |
Theria
|
Node of Origin (family) |
Theria
|
Genome context (GCA_003339765.3_Mmul_10_traces) |
CM014346.1: 97299991-97300049 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CACCCGAGCGUCCAUGGGUCAGCUAUGUGGACUCUAGCUGCCAAAGGCGCUUCUCCUUCUGAACAGAGCGCUUUGCUCAGCCAGUGUAGACAUGGCCUGAUAAACAAUGGAACUUCUCC
Get precursor sequence
|
Structure | 10 20 30 40 50
CACCCGAGCGUCCAUGG- -| GG U A CCA UCUCCUU
GUCA GCUAUGU AC CU GCUG AAGGCGCU \
UAGU CGGUACA UG GA CGAC UUUCGCGA C
CCUCUUCAAGGUAACAAA C^ GA U C UCG GACAAGU
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
Yes
|
Motifs | No |
Tissue expression
|
Bo |
Br |
Br |
Br |
He |
Ki |
Li |
Lu |
Ly |
Sk |
Sp |
Te |
Th |
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Mature sequence |
Mml-Mir-1251_5p |
mirBase accession | MIMAT0028242 |
Sequence |
0- ACUCUAGCUGCCAAAGGCGCU -21
Get sequence
|
Proposed targets |
TargetScanVert: mml-miR-1251-5p
|
Star sequence |
Mml-Mir-1251_3p* |
mirBase accession | MIMAT0028243 |
Sequence |
38- CGCUUUGCUCAGCCAGUGUAG -59
Get sequence
|
Proposed targets |
TargetScanVert: mml-miR-1251-3p
|