MirGeneDB 3.0
MirGeneDB ID

Pab-Mir-1251

Family name MIR-1251 (all species)
Seed CUCUAGC
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues
Orthologues Bta-Mir-1251  Cfa-Mir-1251  Cja-Mir-1251  Cpo-Mir-1251  Dno-Mir-1251  Eca-Mir-1251  Ete-Mir-1251  Hsa-Mir-1251  Laf-Mir-1251  Mdo-Mir-1251  Mml-Mir-1251  Mmr-Mir-1251  Mmu-Mir-1251  Neu-Mir-1251  Ocu-Mir-1251  Rno-Mir-1251  Sha-Mir-1251 
Node of Origin (locus) Theria
Node of Origin (family) Theria
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)		 CM054689.2: 96023777-96023835 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CACCCGAGCAUCCAUGGGUCAGCUAUGUGGACUCUAGCUGCCAAAGGCGCUUCUCCUUCUGAACAGAGCGCUUUGCUCAGCCAGUGUAGACAUGGCCUGAUAAACAAUGGAACUUCUCC
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Structure
        10         20         30        40        50         
CACCCGAGCAUCCAUGG-    -|      GG  U  A    CCA        UCUCCUU 
                  GUCA GCUAUGU  AC CU GCUG   AAGGCGCU       \
                  UAGU CGGUACA  UG GA CGAC   UUUCGCGA       C
CCUCUUCAAGGUAACAAA    C^      GA  U  C    UCG        GACAAGU 
       110       100        90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsNo
Tissue expression
-   +
Br Br Li Li
Mature sequence

Pab-Mir-1251_5p (predicted)
mirBase accessionNone
Sequence 
0- ACUCUAGCUGCCAAAGGCGCU -21
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Star sequence

Pab-Mir-1251_3p* (predicted)
mirBase accessionNone
Sequence 
38- CGCUUUGCUCAGCCAGUGUAG -59
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