| MirGeneDB ID | Pab-Mir-1251 |
|---|---|
| Family name | MIR-1251 (all species) |
| Seed | CUCUAGC |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-1251 Cfa-Mir-1251 Cja-Mir-1251 Cpo-Mir-1251 Dno-Mir-1251 Eca-Mir-1251 Ete-Mir-1251 Hsa-Mir-1251 Laf-Mir-1251 Mdo-Mir-1251 Mml-Mir-1251 Mmr-Mir-1251 Mmu-Mir-1251 Neu-Mir-1251 Ocu-Mir-1251 Rno-Mir-1251 Sha-Mir-1251 |
| Node of Origin (locus) | Theria |
| Node of Origin (family) | Theria |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054689.2: 96023777-96023835 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CACCCGAGCAUCCAUGGGUCAGCUAUGUGGACUCUAGCUGCCAAAGGCGCUUCUCCUUCUGAACAGAGCGCUUUGCUCAGCCAGUGUAGACAUGGCCUGAUAAACAAUGGAACUUCUCCGet precursor sequence |
| Structure | 10 20 30 40 50 CACCCGAGCAUCCAUGG- -| GG U A CCA UCUCCUU GUCA GCUAUGU AC CU GCUG AAGGCGCU \ UAGU CGGUACA UG GA CGAC UUUCGCGA C CCUCUUCAAGGUAACAAA C^ GA U C UCG GACAAGU 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Mature sequence | Pab-Mir-1251_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- ACUCUAGCUGCCAAAGGCGCU -21
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|
| Star sequence | Pab-Mir-1251_3p* (predicted) |
| mirBase accession | None |
| Sequence |
38- CGCUUUGCUCAGCCAGUGUAG -59
Get sequence
|
