MirGeneDB 3.0
MirGeneDB ID

Sha-Mir-1251

Family name MIR-1251 (all species)
Seed CUCUAGC
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues
Orthologues Bta-Mir-1251  Cfa-Mir-1251  Cja-Mir-1251  Cpo-Mir-1251  Dno-Mir-1251  Eca-Mir-1251  Ete-Mir-1251  Hsa-Mir-1251  Laf-Mir-1251  Mdo-Mir-1251  Mml-Mir-1251  Mmr-Mir-1251  Mmu-Mir-1251  Neu-Mir-1251  Ocu-Mir-1251  Pab-Mir-1251  Rno-Mir-1251 
Node of Origin (locus) Theria
Node of Origin (family) Theria
Genome context
(DEVIL_add)		 GL861598.1: 2793465-2793523 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCUCCCUCCCCUAACAGAUCAGCUAUGUAGACUCUAGCUGACUAAGGCGCUUCUCUUUCUAAAAAGAGCGCUUUACUUAGCCAGUGUAGACAUGGCCUGAUGAACAUUGGAACUACUUC
Get precursor sequence
Structure
        10         20         30        40        50         
CCUCCCUCCCCUAACAG-    -|      AG  U  A     C         UCUCUUU 
                  AUCA GCUAUGU  AC CU GCUGA UAAGGCGCU       \
                  UAGU CGGUACA  UG GA CGAUU AUUUCGCGA       C
CUUCAUCAAGGUUACAAG    C^      GA  U  C     C         GAAAAAU 
       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsNo
Tissue expression
-   +
Bo Br He Ki Li Ly Pa Sk Sp Te
Mature sequence

Sha-Mir-1251_5p
mirBase accessionNone
Sequence 
0- ACUCUAGCUGACUAAGGCGCU -21
Get sequence
Star sequence

Sha-Mir-1251_3p* (predicted)
mirBase accessionNone
Sequence 
38- CGCUUUACUUAGCCAGUGUAG -59
Get sequence