MirGeneDB ID | Bta-Mir-324 |
Family name |
MIR-324 (all species) |
Seed |
GCAUCCC |
Species |
Cow (Bos taurus) |
MiRBase ID |
bta-mir-324
|
Paralogues |
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Orthologues |
Cfa-Mir-324
Cja-Mir-324
Cpo-Mir-324
Dno-Mir-324
Eca-Mir-324
Ete-Mir-324
Hsa-Mir-324
Laf-Mir-324
Mml-Mir-324
Mmr-Mir-324
Mmu-Mir-324
Ocu-Mir-324
Pab-Mir-324
Rno-Mir-324
|
Node of Origin (locus) |
Eutheria
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Node of Origin (family) |
Eutheria
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Genome context (GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037346.1: 26938018-26938074 [-]
UCSC
Ensembl
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Precursor (pre-Mir +30nt flank) |
CCUGCAGAAGCUGAACUGGCUAUGCCUCCCCGCAUCCCCUAGGGCAUUGGUGUAAAGCUGGAGACCCACUGCCCCAGGUGCUGCUGGGGGUUGUAGUCUGACCCAUCUGGGAAGAAG
Get precursor sequence
|
Structure | 10 20 30 40 50
CCUGCAGAAGCUGAACU--| GC C UCC A U U AAAG
GGCUAU CUCCC GCA CCU GGGCA UGG GU C
CUGAUG GGGGG CGU GGA CCCGU ACC CA U
GAAGAAGGGUCUACCCAGU^ UU U CGU C C - GAGG
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
Comment | There is a second Dicer cut -2 on both arms. |
3' NTU |
No
|
Motifs | UG at 5p(-14), CNNC at 3p(+17) |
Tissue expression
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Ad |
Bo |
Br |
Ce |
Co |
Co |
De |
Fe |
He |
Hy |
Ir |
Ki |
La |
Lo |
Mi |
No |
Op |
Or |
Pe |
Re |
Su |
Te |
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Mature sequence |
Bta-Mir-324_5p |
mirBase accession | MIMAT0009285 |
Sequence |
0- CGCAUCCCCUAGGGCAUUGGUGU -23
Get sequence
|
Proposed targets |
TargetScanVert: bta-miR-324
|
Star sequence |
Bta-Mir-324_3p* |
mirBase accession | None |
Sequence |
35- CCACUGCCCCAGGUGCUGCUGG -57
Get sequence
|