MirGeneDB ID | Pab-Mir-324 |
---|---|
Family name | MIR-324 (all species) |
Seed | GCAUCCC |
Species | Sumatran orangutan (Pongo abelii) |
MiRBase ID | |
Paralogues | |
Orthologues | Bta-Mir-324 Cfa-Mir-324 Cja-Mir-324 Cpo-Mir-324 Dno-Mir-324 Eca-Mir-324 Ete-Mir-324 Hsa-Mir-324 Laf-Mir-324 Mml-Mir-324 Mmr-Mir-324 Mmu-Mir-324 Ocu-Mir-324 Rno-Mir-324 |
Node of Origin (locus) | Eutheria |
Node of Origin (family) | Eutheria |
Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054698.2: 7072981-7073037 [-] UCSC Ensembl |
Precursor (pre-Mir +30nt flank) | CUUCCAGAAGCUGAGCUGACUAUGCCUCCCCGCAUCCCCUAGGGCAUUGGUGUAAAGCUGGAGACCCACUGCCCCAGGUGCUGCUGGGGGUUGUAGUCUGACCCGACUGGGAAGAAAGet precursor sequence |
Structure | 10 20 30 40 50 CUUCCAGAAGCUGAGCU--| GC C UCC A U U AAAG GACUAU CUCCC GCA CCU GGGCA UGG GU C CUGAUG GGGGG CGU GGA CCCGU ACC CA U AAAGAAGGGUCAGCCCAGU^ UU U CGU C C - GAGG 110 100 90 80 70 60 |
Deep sequencing | |
3' NTU | Unknown |
Motifs | UG at 5p(-14), CNNC at 3p(+17) |
Mature sequence | Pab-Mir-324_5p |
mirBase accession | None |
Sequence |
0- CGCAUCCCCUAGGGCAUUGGUGU -23
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|
Star sequence | Pab-Mir-324_3p* (predicted) |
mirBase accession | None |
Sequence |
35- CCACUGCCCCAGGUGCUGCUGG -57
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