MirGeneDB 3.0
MirGeneDB ID

Cel-Mir-1829-P3

Family name MIR-1829 (all species)
Seed AGCGAAA
Species Roundworm (Caenorhabditis elegans)
MiRBase ID cel-mir-1829c
Paralogues Cel-Mir-1829-P1  Cel-Mir-1829-P2  Cel-Mir-1829-P4 
Orthologues
Node of Origin (locus) C. elegans
Node of Origin (family) C. elegans
Genome context
(ce11)		 chrX: 15236364-15236423 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-1829-P3)		 Mir-1829-P3 chrX: 15236364-15236423 [-] UCSC Ensembl
Mir-1829-P4 chrX: 15242784-15242843 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGCUAAAUCCUUUGUUCAGUUAUUAUAAGUAAGCGAAAUUCAAGAUGGUUGUAAAACAUCGAGUACUACAACCACUGGAAUUUCUCUAUUGCAUUUUUGGAUGGGCAAAGUCGCAGUACU
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Structure
        10        20        30          40        50          
UGCUAAAUCCUUUGUUCAGUUAUUAUAA   --| C       A  A        AAACAU 
                            GUA  AG GAAAUUC AG UGGUUGUA      \
                            CGU  UC CUUUAAG UC ACCAACAU      C
UCAUGACGCUGAAACGGGUAGGUUUUUA   UA^ U       G  -        CAUGAG 
.       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Da Ea Mi Wi Yo Yo
Mature sequence

Cel-Mir-1829-P3_5p
mirBase accessionMIMAT0006771
Sequence 
0- AAGCGAAAUUCAAGAUGGUUGUA -23
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Proposed targets microrna.org: MIMAT0006771
TargetScanWorm: cel-miR-1829c
Star sequence

Cel-Mir-1829-P3_3p*
mirBase accessionMIMAT0032038
Sequence 
38- CAACCACUGGAAUUUCUCUAUU -60
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