| MirGeneDB ID | Cja-Mir-331 |
|---|---|
| Family name | MIR-331 (all species) |
| Seed | CCCCUGG |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-331 Cfa-Mir-331 Cpo-Mir-331 Dno-Mir-331 Eca-Mir-331 Ete-Mir-331 Hsa-Mir-331 Laf-Mir-331 Mml-Mir-331 Mmr-Mir-331 Mmu-Mir-331 Ocu-Mir-331 Pab-Mir-331 Rno-Mir-331 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021923.1: 94905695-94905752 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CCCAAGGAGUUUGGUUUUGUUUGGGUUUGUUCUAGGUAUGGUCCCAGGGAUCCCAGAUUAAACCAGGCCCCUGGGCCUAUCCUAGAACCAACCUAAACUCGCGCAUCAUUCCUGGAACGet precursor sequence |
| Structure | 10 20 30 40 50 CCCAAGGAGUUUGGUUUU--| U U U AU CCAGAU GUUUGGGUU GUUCUAGG AUGG CCCAGGG C \ CAAAUCCAA CAAGAUCC UAUC GGGUCCC G U CAAGGUCCUUACUACGCGCU^ C - C CG ACCAAA 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Cja-Mir-331_5p* |
| mirBase accession | None |
| Sequence |
0- UCUAGGUAUGGUCCCAGGGAUCC -23
Get sequence
|
| Mature sequence | Cja-Mir-331_3p |
| mirBase accession | None |
| Sequence |
36- GCCCCUGGGCCUAUCCUAGAAC -58
Get sequence
|
