MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-331

Family name MIR-331 (all species)
Seed CCCCUGG
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues
Orthologues Bta-Mir-331  Cfa-Mir-331  Cpo-Mir-331  Dno-Mir-331  Eca-Mir-331  Ete-Mir-331  Hsa-Mir-331  Laf-Mir-331  Mml-Mir-331  Mmr-Mir-331  Mmu-Mir-331  Ocu-Mir-331  Pab-Mir-331  Rno-Mir-331 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021923.1: 94905695-94905752 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCCAAGGAGUUUGGUUUUGUUUGGGUUUGUUCUAGGUAUGGUCCCAGGGAUCCCAGAUUAAACCAGGCCCCUGGGCCUAUCCUAGAACCAACCUAAACUCGCGCAUCAUUCCUGGAAC
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Structure
        10          20        30        40        50         
CCCAAGGAGUUUGGUUUU--|        U        U    U       AU CCAGAU 
                    GUUUGGGUU GUUCUAGG AUGG CCCAGGG  C      \
                    CAAAUCCAA CAAGAUCC UAUC GGGUCCC  G      U
CAAGGUCCUUACUACGCGCU^        C        -    C       CG ACCAAA 
      110       100        90         80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Cja-Mir-331_5p*
mirBase accessionNone
Sequence 
0- UCUAGGUAUGGUCCCAGGGAUCC -23
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Mature sequence

Cja-Mir-331_3p
mirBase accessionNone
Sequence 
36- GCCCCUGGGCCUAUCCUAGAAC -58
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