| MirGeneDB ID | Laf-Mir-331 |
|---|---|
| Family name | MIR-331 (all species) |
| Seed | UAGGUAU |
| Species | African bush elephant (Loxodonta africana) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-331 Cfa-Mir-331 Cja-Mir-331 Cpo-Mir-331 Dno-Mir-331 Eca-Mir-331 Ete-Mir-331 Hsa-Mir-331 Mml-Mir-331 Mmr-Mir-331 Mmu-Mir-331 Ocu-Mir-331 Pab-Mir-331 Rno-Mir-331 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_000001905.1_Loxafr3.0) |
GL010029.1: 89810782-89810837 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CCGUGGAAUUUGGUUUUGUUUGGGUUUGUUCUAGGUAUGGUCCCAGGGAUCCCAGAUCAAACCAGGCCCCUGGGCCUAUCCUAGAACCAACCUAAACUCUUGCAUCAUUCCUGGAGGet precursor sequence |
| Structure | 10 20 30 40 50 CCGUGGAAUUUGGUUUU--| U U U AU CCAGAU GUUUGGGUU GUUCUAGG AUGG CCCAGGG C \ CAAAUCCAA CAAGAUCC UAUC GGGUCCC G C GAGGUCCUUACUACGUUCU^ C - C CG ACCAAA 110 100 90 80 70 60 |
| Deep sequencing | |
| Comment | There is a second Drosha cut -1 on both arms. |
| 3' NTU | No |
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
| Mature sequence | Laf-Mir-331_5p |
| mirBase accession | None |
| Sequence |
0- CUAGGUAUGGUCCCAGGGAUCC -22
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|
| Co-mature sequence | Laf-Mir-331_3p |
| mirBase accession | None |
| Sequence |
35- GCCCCUGGGCCUAUCCUAGAA -56
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|
