MirGeneDB 3.0
MirGeneDB ID

Cpo-Mir-331

Family name MIR-331 (all species)
Seed CCCCUGG
Species Guinea pig (Cavia porcellus)
MiRBase ID cpo-mir-331
Paralogues
Orthologues Bta-Mir-331  Cfa-Mir-331  Cja-Mir-331  Dno-Mir-331  Eca-Mir-331  Ete-Mir-331  Hsa-Mir-331  Laf-Mir-331  Mml-Mir-331  Mmr-Mir-331  Mmu-Mir-331  Ocu-Mir-331  Pab-Mir-331  Rno-Mir-331 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(cavPor3)		 scaffold_9: 6259331-6259386 [-] UCSC
Precursor
(pre-Mir +30nt flank)
CCAAGGAGUUUGGUUCUGUUUGGGUUUGUUCUAGGUAUGGUCCCAGGGAUCCCAGAUCCAACCAGGCCCCUGGGCCUAUCCUAGAACCAACCUAAGCCCGUGCAUCACUCCUGACG
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Structure
        10          20        30        40        50        
CCAAGGAGUUUGGUUCU--|        U        U    U       AU CCAGAU 
                   GUUUGGGUU GUUCUAGG AUGG CCCAGGG  C      \
                   CGAAUCCAA CAAGAUCC UAUC GGGUCCC  G      C
GCAGUCCUCACUACGUGCC^        C        -    C       CG ACCAAC 
    110       100        90        80         70        60
Deep sequencing
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CommentThere is a second Drosha cut -1 on both arms.
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Bl Bl Bl Bl Oo Oo Oo Oo To Wh
Star sequence

Cpo-Mir-331_5p*
mirBase accessionMIMAT0047168
Sequence 
0- CUAGGUAUGGUCCCAGGGAUCC -22
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Mature sequence

Cpo-Mir-331_3p
mirBase accessionMIMAT0047169
Sequence 
35- GCCCCUGGGCCUAUCCUAGAA -56
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