| MirGeneDB ID | Cja-Mir-452-v2 |
|---|---|
| Family name | MIR-452 (all species) |
| Seed | GUUUGCA |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | Cja-Mir-452-v1 |
| Orthologues | Bta-Mir-452-v2 Cfa-Mir-452-v2 Cpo-Mir-452-v2 Ete-Mir-452-v2 Hsa-Mir-452-v2 Laf-Mir-452 Mml-Mir-452-v2 Mmr-Mir-452-v2 Mmu-Mir-452-v2 Ocu-Mir-452-v2 Pab-Mir-452-v2 Rno-Mir-452-v2 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021937.1: 143634334-143634390 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CCUGACUUCUAAUUGCUAAGCACUUACAACUGUUUGCAGAGGAAACUGAGACUUUGUAACUAUGUCUCAGUCUUAUCUGCAAAGAAGUAAGUGCUUUGCCAAGCCCCUUGAGAGAUUGet precursor sequence |
| Structure | 10 20 30 40 50 CCUGACUUCUAAUUGCU----| AA GU G A UUUGU AAGCACUUAC CU UUGCAGA GA ACUGAGAC \ UUCGUGAAUG GA AACGUCU UU UGACUCUG A UUAGAGAGUUCCCCGAACCGU^ AA -- A C UAUCA 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Cja-Mir-452-v2_5p |
| mirBase accession | None |
| Sequence |
0- UGUUUGCAGAGGAAACUGAGAC -22
Get sequence
|
| Star sequence | Cja-Mir-452-v2_3p* (predicted) |
| mirBase accession | None |
| Sequence |
35- CUCAGUCUUAUCUGCAAAGAAG -57
Get sequence
|
