MirGeneDB 3.0
MirGeneDB ID

Cpo-Mir-452-v2

Family name MIR-452 (all species)
Seed GUUUGCA
Species Guinea pig (Cavia porcellus)
MiRBase ID cpo-mir-452
Paralogues Cpo-Mir-452-v1 
Orthologues Bta-Mir-452-v2  Cfa-Mir-452-v2  Cja-Mir-452-v2  Ete-Mir-452-v2  Hsa-Mir-452-v2  Laf-Mir-452  Mml-Mir-452-v2  Mmr-Mir-452-v2  Mmu-Mir-452-v2  Ocu-Mir-452-v2  Pab-Mir-452-v2  Rno-Mir-452-v2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(cavPor3)		 scaffold_197: 1057811-1057867 [-] UCSC
Clustered miRNAs
(< 50kb from Mir-452-v2)		 Mir-224 scaffold_197: 1056776-1056844 [-] UCSC
Mir-452-v1 scaffold_197: 1057810-1057870 [-] UCSC
Mir-452-v2 scaffold_197: 1057811-1057867 [-] UCSC
Precursor
(pre-Mir +30nt flank)
CUGAUCUUGUAAAUGCUAAGCACUUACAACUGUUUGCAGAGGAAACUGAGACUUUGCAACUAUGUCUCAGUCUCAUCUGCAAAGAAGUAAGUGCUUUGCCAAGCCCCUUGAGAGGAU
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Structure
        10            20        30        40        50        
CUGAUCUUGUAAAUGCU----|         AA  GU       G  A        UUUGC 
                     AAGCACUUAC  CU  UUGCAGA GA ACUGAGAC     \
                     UUCGUGAAUG  GA  AACGUCU CU UGACUCUG     A
UAGGAGAGUUCCCCGAACCGU^         AA  --       A  C        UAUCA 
     110       100        90          80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Bl Bl Bl Bl Oo Oo Oo Oo To Wh
Mature sequence

Cpo-Mir-452-v2_5p
mirBase accessionMIMAT0047267
Sequence 
0- UGUUUGCAGAGGAAACUGAGAC -22
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Star sequence

Cpo-Mir-452-v2_3p*
mirBase accessionMIMAT0047268
Sequence 
35- CUCAGUCUCAUCUGCAAAGAAG -57
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