MirGeneDB 3.0
MirGeneDB ID

Cpo-Mir-224

Family name MIR-224 (all species)
Seed AAGUCAC
Species Guinea pig (Cavia porcellus)
MiRBase ID cpo-mir-224
Paralogues
Orthologues Bta-Mir-224  Cfa-Mir-224  Cja-Mir-224  Eca-Mir-224  Ete-Mir-224  Hsa-Mir-224  Laf-Mir-224  Mml-Mir-224  Mmr-Mir-224  Mmu-Mir-224  Ocu-Mir-224  Pab-Mir-224  Rno-Mir-224 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(cavPor3)		 scaffold_197: 1056776-1056844 [-] UCSC
Clustered miRNAs
(< 50kb from Mir-224)		 Mir-224 scaffold_197: 1056776-1056844 [-] UCSC
Mir-452-v1 scaffold_197: 1057810-1057870 [-] UCSC
Mir-452-v2 scaffold_197: 1057811-1057867 [-] UCSC
Precursor
(pre-Mir +30nt flank)
GCAGCAGACGAGACAAGGCCCAGGGGCUUUUAAGUCACUAGUGGUUCCGUUUAGUAGAUGUUUGUGCAUUGUUUCAAAAUGGUGCCCUAGUGACUACAAAGCCCCAUGGCCAGCAUCUUCACCAGAUCA
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Structure
        10          20        30        40        50        60    
GCAGCAGACGAGACAAG--|  CA        UA         U   U      AGUAGAUGUUU 
                   GCC  GGGGCUUU  AGUCACUAG GGU CCGUUU           G
                   CGG  CCCCGAAA  UCAGUGAUC CCG GGUAAA           U
ACUAGACCACUUCUACGAC^  UA        CA         -   U      ACUUUGUUACG 
       120       110       100        90         80        70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Bl Bl Bl Bl Oo Oo Oo Oo To Wh
Mature sequence

Cpo-Mir-224_5p
mirBase accessionMIMAT0047136
Sequence 
0- UAAGUCACUAGUGGUUCCGUUUAG -24
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Star sequence

Cpo-Mir-224_3p* (predicted)
mirBase accessionMIMAT0047137
Sequence 
46- AAAUGGUGCCCUAGUGACUACAA -69
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