| MirGeneDB ID | Eca-Mir-224 |
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| Family name |
MIR-224 (all species) |
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| Seed |
AAGUCAC |
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| Species |
Horse (Equus caballus) |
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| MiRBase ID |
eca-mir-224
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| Paralogues |
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| Orthologues |
Bta-Mir-224
Cfa-Mir-224
Cja-Mir-224
Cpo-Mir-224
Ete-Mir-224
Hsa-Mir-224
Laf-Mir-224
Mml-Mir-224
Mmr-Mir-224
Mmu-Mir-224
Ocu-Mir-224
Pab-Mir-224
Rno-Mir-224
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| Node of Origin (locus) |
Eutheria
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| Node of Origin (family) |
Eutheria
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Genome context
(GCA_002863925.1_EquCab3.0) |
CM009179.1: 124794225-124794293 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GCAGCAGAGGAGACAAGGGCCAGGGGCUUUCAAGUCACUAGUGGUUCCGUUUAGUAGAUGGUUGUGCAUUGUUUCAAAAUGGUGCCCUAGUGACUACAAAGCCCCAGAGCCAGCAUCAUCACCGAAGCA
Get precursor sequence
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| Structure | 10 20 30 40 50 60
GCAGCAGAGGAGACAAG- CA-| CA U U AGUAGAUGGUU
GGC GGGGCUUU AGUCACUAG GGU CCGUUU G
CCG CCCCGAAA UCAGUGAUC CCG GGUAAA U
ACGAAGCCACUACUACGA AGA^ CA - U ACUUUGUUACG
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
Unknown
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Ps |
Bo |
Ca |
Em |
En |
En |
En |
En |
En |
En |
En |
Gl |
He |
He |
Ho |
Im |
Ki |
Li |
Lo |
Lu |
Ma |
Ma |
Mi |
Pl |
Sp |
Te |
Tr |
Ut |
Ut |
Yo |
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| Mature sequence |
Eca-Mir-224_5p |
| mirBase accession | MIMAT0013206 |
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| Sequence |
0- CAAGUCACUAGUGGUUCCGUUUAG -24
Get sequence
|
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| Star sequence |
Eca-Mir-224_3p* (predicted) |
| mirBase accession | None |
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| Sequence |
46- AAAUGGUGCCCUAGUGACUACAA -69
Get sequence
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