| MirGeneDB ID | Pab-Mir-224 |
|---|
| Family name |
MIR-224 (all species) |
|---|
| Seed |
AAGUCAC |
|---|
| Species |
Sumatran orangutan (Pongo abelii) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Bta-Mir-224
Cfa-Mir-224
Cja-Mir-224
Cpo-Mir-224
Eca-Mir-224
Ete-Mir-224
Hsa-Mir-224
Laf-Mir-224
Mml-Mir-224
Mmr-Mir-224
Mmu-Mir-224
Ocu-Mir-224
Rno-Mir-224
|
|---|
| Node of Origin (locus) |
Eutheria
|
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| Node of Origin (family) |
Eutheria
|
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Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054702.2: 158464420-158464488 [-]
UCSC
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
GUGACAGAGAAGAUAAGGCCCAGGGGCUUUCAAGUCACUAGUGGUUCCGUUUAGUAGAUGAUUGUGCAUUGUUUCAAAAUGGUGCCCUAGUGACUACAAAGCCCCAGAGCCAGCAUCGUCAUCAAAGCA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
GUGACAGAGAAGAUAAG--| CCA CA U U AGUAGAUGAUU
GC GGGGCUUU AGUCACUAG GGU CCGUUU G
CG CCCCGAAA UCAGUGAUC CCG GGUAAA U
ACGAAACUACUGCUACGAC^ AGA CA - U ACUUUGUUACG
120 110 100 90 80 70 |
|---|
| Deep sequencing |
|
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| 3' NTU |
Unknown
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Pab-Mir-224_5p (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- CAAGUCACUAGUGGUUCCGUUUAG -24
Get sequence
|
|---|
| Star sequence |
Pab-Mir-224_3p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
46- AAAUGGUGCCCUAGUGACUACAA -69
Get sequence
|
|---|
