| MirGeneDB ID | Cja-Mir-224 |
|---|---|
| Family name | MIR-224 (all species) |
| Seed | AAGUCAC |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-224 Cfa-Mir-224 Cpo-Mir-224 Eca-Mir-224 Ete-Mir-224 Hsa-Mir-224 Laf-Mir-224 Mml-Mir-224 Mmr-Mir-224 Mmu-Mir-224 Ocu-Mir-224 Pab-Mir-224 Rno-Mir-224 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021937.1: 143633283-143633351 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | GUGACAGAGGAGAUAAGGCCCAGGGGCUUUCAAGUCACUAGUGGUUCCAUUUAGUAGAUGGUUGUGCAUUGUUUCAAAAUGGUGCCCUAGUGACUACAAAGCCCCAGAGCCAGUAUCAUCACCAAAGCAGet precursor sequence |
| Structure | 10 20 30 40 50 60 GUGACAGAGGAGAUAAG--| CCA CA U U AGUAGAUGGUU GC GGGGCUUU AGUCACUAG GGU CCAUUU G CG CCCCGAAA UCAGUGAUC CCG GGUAAA U ACGAAACCACUACUAUGAC^ AGA CA - U ACUUUGUUACG 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Cja-Mir-224_5p |
| mirBase accession | None |
| Sequence |
0- CAAGUCACUAGUGGUUCCAUUUAG -24
Get sequence
|
| Star sequence | Cja-Mir-224_3p* |
| mirBase accession | None |
| Sequence |
46- AAAUGGUGCCCUAGUGACUACAA -69
Get sequence
|
