MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-224

Family name MIR-224 (all species)
Seed AAGUCAC
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues
Orthologues Bta-Mir-224  Cfa-Mir-224  Cpo-Mir-224  Eca-Mir-224  Ete-Mir-224  Hsa-Mir-224  Laf-Mir-224  Mml-Mir-224  Mmr-Mir-224  Mmu-Mir-224  Ocu-Mir-224  Pab-Mir-224  Rno-Mir-224 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021937.1: 143633283-143633351 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUGACAGAGGAGAUAAGGCCCAGGGGCUUUCAAGUCACUAGUGGUUCCAUUUAGUAGAUGGUUGUGCAUUGUUUCAAAAUGGUGCCCUAGUGACUACAAAGCCCCAGAGCCAGUAUCAUCACCAAAGCA
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Structure
        10          20        30        40        50        60    
GUGACAGAGGAGAUAAG--| CCA        CA         U   U      AGUAGAUGGUU 
                   GC   GGGGCUUU  AGUCACUAG GGU CCAUUU           G
                   CG   CCCCGAAA  UCAGUGAUC CCG GGUAAA           U
ACGAAACCACUACUAUGAC^ AGA        CA         -   U      ACUUUGUUACG 
       120       110       100        90         80        70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Cja-Mir-224_5p
mirBase accessionNone
Sequence 
0- CAAGUCACUAGUGGUUCCAUUUAG -24
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Star sequence

Cja-Mir-224_3p*
mirBase accessionNone
Sequence 
46- AAAUGGUGCCCUAGUGACUACAA -69
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