MirGeneDB 3.0
MirGeneDB ID

Cpo-Mir-452-v1

Family name MIR-452 (all species)
Seed ACUGUUU
Species Guinea pig (Cavia porcellus)
MiRBase ID cpo-mir-452
Paralogues Cpo-Mir-452-v2 
Orthologues Bta-Mir-452-v1  Cfa-Mir-452-v1  Cja-Mir-452-v1  Ete-Mir-452-v1  Hsa-Mir-452-v1  Laf-Mir-452  Mml-Mir-452-v1  Mmr-Mir-452-v1  Mmu-Mir-452-v1  Ocu-Mir-452-v1  Pab-Mir-452-v1  Rno-Mir-452-v1 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(cavPor3)		 scaffold_197: 1057810-1057870 [-] UCSC
Clustered miRNAs
(< 50kb from Mir-452-v1)		 Mir-224 scaffold_197: 1056776-1056844 [-] UCSC
Mir-452-v1 scaffold_197: 1057810-1057870 [-] UCSC
Mir-452-v2 scaffold_197: 1057811-1057867 [-] UCSC
Precursor
(pre-Mir +30nt flank)
GCUCUGAUCUUGUAAAUGCUAAGCACUUACAACUGUUUGCAGAGGAAACUGAGACUUUGCAACUAUGUCUCAGUCUCAUCUGCAAAGAAGUAAGUGCUUUGCCAAGCCCCUUGAGAGGAUA
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Structure
        10          20        30        40        50        60 
GCUCUGAUCUUGUAAAU--| U          AA  GU       G  A       CUUUGC 
                   GC AAGCACUUAC  CU  UUGCAGA GA ACUGAGA      \
                   CG UUCGUGAAUG  GA  AACGUCU CU UGACUCU      A
AUAGGAGAGUUCCCCGAAC^ U          AA  --       A  C       GUAUCA 
 .       110       100        90          80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Bl Bl Bl Bl Oo Oo Oo Oo To Wh
Mature sequence

Cpo-Mir-452-v1_5p
mirBase accessionMIMAT0047267
Sequence 
0- AACUGUUUGCAGAGGAAACUGAGA -24
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Co-mature sequence

Cpo-Mir-452-v1_3p
mirBase accessionMIMAT0047268
Sequence 
39- UCAGUCUCAUCUGCAAAGAAGU -61
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