Mir-452-v1

MirGeneDB ID

Mmu-Mir-452-v1

Family name

MIR-452 (all species)

Seed

ACUGUUU

Species

House mouse (Mus musculus)

MiRBase ID

mmu-mir-452

Paralogues

Mmu-Mir-452-v2

Orthologues

Bta-Mir-452-v1 Cfa-Mir-452-v1 Cpo-Mir-452-v1 Ete-Mir-452-v1 Hsa-Mir-452-v1 Mml-Mir-452-v1 Ocu-Mir-452-v1 Rno-Mir-452-v1

Node of Origin (locus)

Eutheria

Node of Origin (family)

Eutheria

Genome context
(mm10)

chrX: 72262235-72262295 [-] UCSC Ensembl

Clustered miRNAs
(< 50kb from Mir-452-v1)

Mir-224 chrX: 72261036-72261105 [-] UCSC Ensembl
Mir-452-v1 chrX: 72262235-72262295 [-] UCSC Ensembl
Mir-452-v2 chrX: 72262236-72262292 [-] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

ACUCCUCUCUUAUAUAUGCUAAGCAGUUACAACUGUUUGCAGAGGAAACUGAGACUUUAUAACUAUGUCUCAGUCUCAUCUGCAAAGAGGUAAGUGCUUUGCCAAGCCCCUUGAAGAAUGG

Get precursor sequence

Structure

        10          20        30        40        50        60 
ACUCCUCUCUUAUAUAU--| U     G    AA  G        G  A       CUUUAU 
                   GC AAGCA UUAC  CU UUUGCAGA GA ACUGAGA      \
                   CG UUCGU AAUG  GA AAACGUCU CU UGACUCU      A
GGUAAGAAGUUCCCCGAAC^ U     G    --  G        A  C       GUAUCA 
 .       110       100        90          80        70

Deep sequencing

Go to detailed chart

3' NTU

Motifs

UG at 5p(-14), CNNC at 3p(+17)

Tissue expression

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Mature sequence

Mmu-Mir-452-v1_5p

mirBase accession

MIMAT0001637

Sequence

0- AACUGUUUGCAGAGGAAACUGAGA -24

Get sequence

Proposed targets

microrna.org: MIMAT0001637
miRDB: MIMAT0001637

Star sequence

Mmu-Mir-452-v1_3p*

mirBase accession

MIMAT0017194

Sequence

39- UCAGUCUCAUCUGCAAAGAGGU -61

Get sequence

Proposed targets

TargetScanVert: mmu-miR-452-3p
miRDB: MIMAT0017194