| MirGeneDB ID | Pab-Mir-452-v1 |
|---|---|
| Family name | MIR-452 (all species) |
| Seed | ACUGUUU |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | Pab-Mir-452-v2 |
| Orthologues | Bta-Mir-452-v1 Cfa-Mir-452-v1 Cja-Mir-452-v1 Cpo-Mir-452-v1 Ete-Mir-452-v1 Hsa-Mir-452-v1 Laf-Mir-452 Mml-Mir-452-v1 Mmr-Mir-452-v1 Mmu-Mir-452-v1 Ocu-Mir-452-v1 Rno-Mir-452-v1 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054702.2: 158465475-158465535 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | GCUCCUGUCUUAUAAUUGCUAAGCACUUACAACUGUUUGCAGAGGAAACUGAGACUUUGUAACUAUGUCUCAGUCUCAUCUGCAAAGAAGUAAGUGCUUUGCCAAGCUCCUUGAGAGGUUAGet precursor sequence |
| Structure | 10 20 30 40 50 60 GCUCCUGUCUUAUAAUU--| U AA GU G A CUUUGU GC AAGCACUUAC CU UUGCAGA GA ACUGAGA \ CG UUCGUGAAUG GA AACGUCU CU UGACUCU A AUUGGAGAGUUCCUCGAAC^ U AA -- A C GUAUCA . 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
| Mature sequence | Pab-Mir-452-v1_5p |
| mirBase accession | None |
| Sequence |
0- AACUGUUUGCAGAGGAAACUGAGA -24
Get sequence
|
| Star sequence | Pab-Mir-452-v1_3p* (predicted) |
| mirBase accession | None |
| Sequence |
39- UCAGUCUCAUCUGCAAAGAAGU -61
Get sequence
|
