| MirGeneDB ID | Laf-Mir-452 |
|---|---|
| Family name | MIR-452 (all species) |
| Seed | ACUGUUU |
| Species | African bush elephant (Loxodonta africana) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-452-v1 Bta-Mir-452-v2 Cfa-Mir-452-v1 Cfa-Mir-452-v2 Cja-Mir-452-v1 Cja-Mir-452-v2 Cpo-Mir-452-v1 Cpo-Mir-452-v2 Ete-Mir-452-v1 Ete-Mir-452-v2 Hsa-Mir-452-v1 Hsa-Mir-452-v2 Mml-Mir-452-v1 Mml-Mir-452-v2 Mmr-Mir-452-v1 Mmr-Mir-452-v2 Mmu-Mir-452-v1 Mmu-Mir-452-v2 Ocu-Mir-452-v1 Ocu-Mir-452-v2 Pab-Mir-452-v1 Pab-Mir-452-v2 Rno-Mir-452-v1 Rno-Mir-452-v2 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_000001905.1_Loxafr3.0) |
GL010138.1: 2359494-2359558 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | GCUCCUGUCUUGUAAAUGCUAAGCACUUACAACUGUUUGCAGAGGAAACUGAGACUUUGUAGCUAUGUCUCAGUCUCAUCUGCAAAGAAGUAAGUGCUUUGCCAAGCCCCGGAAAGGGUAGGUAAGet precursor sequence |
| Structure | 10 20 30 40 50 60 GCUCCUGUCUUGUAAAU------| U AA GU G A CUUUGU GC AAGCACUUAC CU UUGCAGA GA ACUGAGA \ CG UUCGUGAAUG GA AACGUCU CU UGACUCU A AAUGGAUGGGAAAGGCCCCGAAC^ U AA -- A C GUAUCG 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | UG at 5p(-14) |
| Mature sequence | Laf-Mir-452_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- AACUGUUUGCAGAGGAAACUGAGA -24
Get sequence
|
| Star sequence | Laf-Mir-452_3p* |
| mirBase accession | None |
| Sequence |
39- UCAGUCUCAUCUGCAAAGAAGUAAGU -65
Get sequence
|
