MirGeneDB 3.0
MirGeneDB ID

Ocu-Mir-452-v2

Family name MIR-452 (all species)
Seed GUUUGCA
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID ocu-mir-452
Paralogues Ocu-Mir-452-v1 
Orthologues Bta-Mir-452-v2  Cfa-Mir-452-v2  Cja-Mir-452-v2  Cpo-Mir-452-v2  Ete-Mir-452-v2  Hsa-Mir-452-v2  Laf-Mir-452  Mml-Mir-452-v2  Mmr-Mir-452-v2  Mmu-Mir-452-v2  Pab-Mir-452-v2  Rno-Mir-452-v2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(oryCun2_add)		 chrUn0033: 726715-726771 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-452-v2)		 Mir-452-v1 chrUn0033: 726712-726772 [+] UCSC Ensembl
Mir-452-v2 chrUn0033: 726715-726771 [+] UCSC Ensembl
Mir-224 chrUn0033: 727743-727810 [+] UCSC Ensembl
Mir-12093 chrUn0033: 727960-728017 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCAGGCUUACAAAUGCUAAGCACUUACAACUGUUUGCAGAGGAAACUGAGACUUUGUAACUAUGUCUCAGUCUCAUCUGCAAAGAAGUAAGUGCUUUGCCAAGCUUCCUGAGAGGAC
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Structure
        10            20        30        40        50        
CCAGGCUUACAAAUGCU----|         AA  GU       G  A        UUUGU 
                     AAGCACUUAC  CU  UUGCAGA GA ACUGAGAC     \
                     UUCGUGAAUG  GA  AACGUCU CU UGACUCUG     A
CAGGAGAGUCCUUCGAACCGU^         AA  --       A  C        UAUCA 
     110       100        90          80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
He Ki Te To Wh
Mature sequence

Ocu-Mir-452-v2_5p
mirBase accessionMIMAT0048463
Sequence 
0- UGUUUGCAGAGGAAACUGAGAC -22
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Star sequence

Ocu-Mir-452-v2_3p*
mirBase accessionMIMAT0048464
Sequence 
35- CUCAGUCUCAUCUGCAAAGAAG -57
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