MirGeneDB ID | Cmi-Mir-191 |
Family name |
MIR-191 (all species) |
Seed |
AACGGAA |
Species |
Australian ghostshark (Callorhinchus milii) |
MiRBase ID |
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Paralogues |
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Orthologues |
Aca-Mir-191
Ami-Mir-191
Bta-Mir-191
Cfa-Mir-191
Cja-Mir-191
Cpi-Mir-191
Cpo-Mir-191
Dno-Mir-191
Dre-Mir-191
Eca-Mir-191
Ete-Mir-191
Gga-Mir-191-v1
Gga-Mir-191-v2
Gja-Mir-191
Gmo-Mir-191
Hsa-Mir-191
Laf-Mir-191
Loc-Mir-191
Mal-Mir-191
Mdo-Mir-191
Mml-Mir-191
Mmr-Mir-191
Mmu-Mir-191
Mun-Mir-191
Neu-Mir-191
Oan-Mir-191
Ocu-Mir-191
Pab-Mir-191
Pbv-Mir-191
Rno-Mir-191
Sha-Mir-191
Spt-Mir-191
Sto-Mir-191
Tgu-Mir-191
Tni-Mir-191
Xla-Mir-191-P1
Xla-Mir-191-P2
Xtr-Mir-191
|
Node of Origin (locus) |
Gnathostomata
|
Node of Origin (family) |
Gnathostomata
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Genome context (GCA_000165045.2_Callorhinchus_milii-6.1.3) |
KI635869.1: 3899821-3899883 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
AGGGGGAAGCAUCUAGUGCGUGGCUAGCGCAAACGGAACCCCAAAAGUAGCUGCCUUGUAGAGAAGAUUCGGCUGCUGUUGAGUUCCGUUGCUGCUGGCCAUGAACUGACUGCUGGAACAUCA
Get precursor sequence
|
Structure | 10 20 30 40 50 60
AGGGGGAAGCAUCUAGUG-- -| A CC A CCUUGUA
CGUGGCUAGC GCAA CGGAAC CAA AGUAGCUG G
GUACCGGUCG CGUU GCCUUG GUU UCGUCGGC A
ACUACAAGGUCGUCAGUCAA U^ - A- G UUAGAAG
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | UG at 5p(-14), CNNC at 3p(+17) |
Tissue expression
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Bl |
Br |
Ey |
Gi |
Gl |
He |
In |
Ki |
Li |
Mu |
Ov |
Pa |
Sk |
Sp |
Te |
Ut |
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Mature sequence |
Cmi-Mir-191_5p |
mirBase accession | None |
Sequence |
0- AAACGGAACCCCAAAAGUAGCUG -23
Get sequence
|
Star sequence |
Cmi-Mir-191_3p* |
mirBase accession | None |
Sequence |
41- GCUGCUGUUGAGUUCCGUUGCU -63
Get sequence
|