MirGeneDB 3.0

MirGeneDB ID

Cmi-Mir-191

Family name MIR-191 (all species)
Seed AACGGAA
Species Australian ghostshark (Callorhinchus milii)
MiRBase ID
Paralogues
Orthologues Aca-Mir-191  Ami-Mir-191  Bta-Mir-191  Cfa-Mir-191  Cja-Mir-191  Cpi-Mir-191  Cpo-Mir-191  Dno-Mir-191  Dre-Mir-191  Eca-Mir-191  Ete-Mir-191  Gga-Mir-191-v1  Gga-Mir-191-v2  Gja-Mir-191  Gmo-Mir-191  Hsa-Mir-191  Laf-Mir-191  Loc-Mir-191  Mal-Mir-191  Mdo-Mir-191  Mml-Mir-191  Mmr-Mir-191  Mmu-Mir-191  Mun-Mir-191  Neu-Mir-191  Oan-Mir-191  Ocu-Mir-191  Pab-Mir-191  Pbv-Mir-191  Rno-Mir-191  Sha-Mir-191  Spt-Mir-191  Sto-Mir-191  Tgu-Mir-191  Tni-Mir-191  Xla-Mir-191-P1  Xla-Mir-191-P2  Xtr-Mir-191 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(GCA_000165045.2_Callorhinchus_milii-6.1.3)
KI635869.1: 3899821-3899883 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGGGGGAAGCAUCUAGUGCGUGGCUAGCGCAAACGGAACCCCAAAAGUAGCUGCCUUGUAGAGAAGAUUCGGCUGCUGUUGAGUUCCGUUGCUGCUGGCCAUGAACUGACUGCUGGAACAUCA
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Structure
        10          20         30        40        50        60 
AGGGGGAAGCAUCUAGUG--          -|   A      CC   A        CCUUGUA 
                    CGUGGCUAGC GCAA CGGAAC  CAA AGUAGCUG       G
                    GUACCGGUCG CGUU GCCUUG  GUU UCGUCGGC       A
ACUACAAGGUCGUCAGUCAA          U^   -      A-   G        UUAGAAG 
 120       110       100        90          80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
Bl Br Ey Gi He In Ki Li Mu Ov Pa Re Sk Sp Te Ut
Mature sequence

Cmi-Mir-191_5p

mirBase accessionNone
Sequence
0- AAACGGAACCCCAAAAGUAGCUG -23
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Star sequence

Cmi-Mir-191_3p*

mirBase accessionNone
Sequence
41- GCUGCUGUUGAGUUCCGUUGCU -63
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