MirGeneDB ID | Eca-Mir-191 |
Family name |
MIR-191 (all species) |
Seed |
AACGGAA |
Species |
Horse (Equus caballus) |
MiRBase ID |
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Paralogues |
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Orthologues |
Aca-Mir-191
Ami-Mir-191
Bta-Mir-191
Cfa-Mir-191
Cja-Mir-191
Cmi-Mir-191
Cpi-Mir-191
Cpo-Mir-191
Dno-Mir-191
Dre-Mir-191
Ete-Mir-191
Gga-Mir-191-v1
Gga-Mir-191-v2
Gja-Mir-191
Gmo-Mir-191
Hsa-Mir-191
Laf-Mir-191
Loc-Mir-191
Mal-Mir-191
Mdo-Mir-191
Mml-Mir-191
Mmr-Mir-191
Mmu-Mir-191
Mun-Mir-191
Neu-Mir-191
Oan-Mir-191
Ocu-Mir-191
Pab-Mir-191
Pbv-Mir-191
Rno-Mir-191
Sha-Mir-191
Spt-Mir-191
Sto-Mir-191
Tgu-Mir-191
Tni-Mir-191
Xla-Mir-191-P1
Xla-Mir-191-P2
Xtr-Mir-191
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Node of Origin (locus) |
Gnathostomata
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Node of Origin (family) |
Gnathostomata
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Genome context (GCA_002863925.1_EquCab3.0) |
CM009163.1: 39558147-39558210 [+]
UCSC
Ensembl
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Precursor (pre-Mir +30nt flank) |
CACCCCCGCCCCCAACGGCUGGACAGCGGGCAACGGAAUCCCAAAAGCAGCUGUUGUCUCCAGAGCAUUCCAGCUGCGCUUGGAUUUCGUUCCCUGCUCUUCUGCCUGAGCAGCGUCUUAGUCC
Get precursor sequence
|
Structure | 10 20 30 40 50 60
CACCCCCGCCCCCAACG--| U C C C AA UUGUCUCC
GC GGA AGCGGG AACGGAAUCC AA GCAGCUG \
CG CUU UCGUCC UUGCUUUAGG UU CGUCGAC A
CCUGAUUCUGCGACGAGUC^ U C C - CG CUUACGAG
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
Comment | There is a second Dicer cut -1 on both arms. |
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
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Ps |
Bo |
Ca |
Em |
En |
En |
En |
En |
En |
En |
En |
Gl |
He |
He |
Ho |
Im |
Ki |
Li |
Lo |
Lu |
Ma |
Ma |
Mi |
Pl |
Sp |
Te |
Tr |
Ut |
Ut |
Yo |
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Mature sequence |
Eca-Mir-191_5p |
mirBase accession | None |
Sequence |
0- CAACGGAAUCCCAAAAGCAGCUG -23
Get sequence
|
Star sequence |
Eca-Mir-191_3p* |
mirBase accession | None |
Sequence |
42- GCUGCGCUUGGAUUUCGUUCCC -64
Get sequence
|