Mir-191-P1

MirGeneDB ID

Xla-Mir-191-P1

Family name

MIR-191 (all species)

Seed

AACGGAA

Species

African clawed frog (Xenopus laevis)

MiRBase ID

Paralogues

Xla-Mir-191-P2

Orthologues

Aca-Mir-191 Ami-Mir-191 Bta-Mir-191 Cfa-Mir-191 Cja-Mir-191 Cmi-Mir-191 Cpi-Mir-191 Cpo-Mir-191 Dno-Mir-191 Dre-Mir-191 Eca-Mir-191 Ete-Mir-191 Gja-Mir-191 Gmo-Mir-191 Hsa-Mir-191 Laf-Mir-191 Loc-Mir-191 Mal-Mir-191 Mdo-Mir-191 Mml-Mir-191 Mmr-Mir-191 Mmu-Mir-191 Mun-Mir-191 Neu-Mir-191 Oan-Mir-191 Ocu-Mir-191 Pab-Mir-191 Pbv-Mir-191 Rno-Mir-191 Sha-Mir-191 Spt-Mir-191 Sto-Mir-191 Tgu-Mir-191 Tni-Mir-191 Xtr-Mir-191

Node of Origin (locus)

X. laevis

Node of Origin (family)

Gnathostomata

Genome context
(GCF_001663975.1_XLA_v2)

NC_030730.1: 131957042-131957101 [-] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

AUGAAGCGGAGGUACAGGCGGUAGCUCUGGCAACGGAAUCCCAAAAGCAGCUGUUGUGGAAAUGUUCAGCUGCAGUUGGGACCCGUUCACUGAUCUAUUGCAAAUUCAUCAUCCACAGGG

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Structure

        10          20        30        40        50          
AUGAAGCGGAGGUACAG--|      C  UGGC     AA      AA       UUGUGG 
                   GCGGUAG UC    AACGG  UCCCAA  GCAGCUG      \
                   CGUUAUC AG    UUGCC  AGGGUU  CGUCGAC      A
GGGACACCUACUACUUAAA^      U  UCAC     C-      GA       UUGUAA 
.       110       100        90         80        70

Deep sequencing

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3' NTU

Motifs

CNNC at 3p(+17)

Tissue expression

Em

Mature sequence

Xla-Mir-191-P1_5p

mirBase accession

None

Sequence

0- CAACGGAAUCCCAAAAGCAGCUG -23

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Star sequence

Xla-Mir-191-P1_3p*

mirBase accession

None

Sequence

38- GCUGCAGUUGGGACCCGUUCAC -60

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