MirGeneDB ID | Sha-Mir-191 |
Family name |
MIR-191 (all species) |
Seed |
AACGGAA |
Species |
Tasmanian devil (Sarcophilus harrisii) |
MiRBase ID |
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Paralogues |
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Orthologues |
Aca-Mir-191
Ami-Mir-191
Bta-Mir-191
Cfa-Mir-191
Cja-Mir-191
Cmi-Mir-191
Cpi-Mir-191
Cpo-Mir-191
Dno-Mir-191
Dre-Mir-191
Eca-Mir-191
Ete-Mir-191
Gga-Mir-191-v1
Gga-Mir-191-v2
Gja-Mir-191
Gmo-Mir-191
Hsa-Mir-191
Laf-Mir-191
Loc-Mir-191
Mal-Mir-191
Mdo-Mir-191
Mml-Mir-191
Mmr-Mir-191
Mmu-Mir-191
Mun-Mir-191
Neu-Mir-191
Oan-Mir-191
Ocu-Mir-191
Pab-Mir-191
Pbv-Mir-191
Rno-Mir-191
Spt-Mir-191
Sto-Mir-191
Tgu-Mir-191
Tni-Mir-191
Xla-Mir-191-P1
Xla-Mir-191-P2
Xtr-Mir-191
|
Node of Origin (locus) |
Gnathostomata
|
Node of Origin (family) |
Gnathostomata
|
Genome context (DEVIL_add) |
GL841583.1: 1573675-1573738 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CUGAAAUGUCUCCAACAGCUUGACAGCGGGCAACGGAAUCCCAAAAGCAGCUGUUGUCUUCAGAGCAUUCCAGCUGCAAUUGGAUUUCGUUCCCUGCUCUCCUGCCUGGGCACCUGUGGGAUCU
Get precursor sequence
|
Structure | 10 20 30 40 50 60
CUGAAAUGUCUCCAACA--| UU C C C AA UUGUCUUC
GC GA AGCGGG AACGGAAUCC AA GCAGCUG \
CG CU UCGUCC UUGCUUUAGG UU CGUCGAC A
UCUAGGGUGUCCACGGGUC^ UC C C - AA CUUACGAG
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
Comment | There is a second Dicer cut -1 on both arms. |
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
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Bo |
Br |
He |
Ki |
Li |
Ly |
Pa |
Sk |
Sp |
Te |
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Mature sequence |
Sha-Mir-191_5p |
mirBase accession | None |
Sequence |
0- CAACGGAAUCCCAAAAGCAGCUG -23
Get sequence
|
Star sequence |
Sha-Mir-191_3p* |
mirBase accession | None |
Sequence |
42- GCUGCAAUUGGAUUUCGUUCCC -64
Get sequence
|