MirGeneDB 3.0
MirGeneDB ID

Cpi-Mir-1677-o7

Family name MIR-1677 (all species)
Seed CCAGAGC
Species Western painted turtle (Chrysemys picta bellii)
MiRBase ID cpi-mir-1677b
Paralogues Cpi-Mir-1677-o6  Cpi-Mir-1677-o8  Cpi-Mir-1677-P1a1  Cpi-Mir-1677-P1a2  Cpi-Mir-1677-P1b  Cpi-Mir-1677-P2  Cpi-Mir-1677-P4 
Orthologues Aca-Mir-1677-P7  Gja-Mir-1677-P7  Pbv-Mir-1677-P7  Spt-Mir-1677-P7 
Node of Origin (locus) C. picta
Node of Origin (family) Diapsida
Genome context
(chrPic1)		 JH584649: 363127-363184 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCUGAGCUGCAAAAGCAACUAAGAGCCUGGUCCAGAGCCCAUUGAAGUCAGUGGGAGAUGUUCUAAUGACUCCAGAGGGCUUUGGAUCAGGCCCUAAGUUAAUCCACUGGAAUCUCUG
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Structure
        10          20        30        40        50        
CCUGAGCUGCAAAAGCA--|  A  A                A   A     GUGGGAG 
                   ACU AG GCCUGGUCCAGAGCCC UUG AGUCA       A
                   UGA UC CGGACUAGGUUUCGGG GAC UCAGU       U
GUCUCUAAGGUCACCUAAU^  A  C                A   C     AAUCUUG 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Te Te Te To
Mature sequence

Cpi-Mir-1677-o7_5p
mirBase accessionMIMAT0037922
Sequence 
0- UCCAGAGCCCAUUGAAGUCAGU -22
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Co-mature sequence

Cpi-Mir-1677-o7_3p
mirBase accessionMIMAT0037923
Sequence 
36- UGACUCCAGAGGGCUUUGGAUC -58
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