| MirGeneDB ID | Cpi-Mir-7147 |
|---|
| Family name |
MIR-7147 (all species) |
|---|
| Seed |
GUACCAU |
|---|
| Species |
Western painted turtle (Chrysemys picta bellii) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
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| Orthologues |
Dre-Mir-7147
Lch-Mir-7147
Loc-Mir-7147
Mal-Mir-7147
Tni-Mir-7147
Xla-Mir-7147-P1
Xla-Mir-7147-P2
Xtr-Mir-7147
|
|---|
| Node of Origin (locus) |
Osteichthyes
|
|---|
| Node of Origin (family) |
Osteichthyes
|
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Genome context
(chrPic1) |
JH584538: 6419185-6419243 [-]
UCSC
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
AAAGCUCUCCAUCUCUGGAGUAACCAGUUAUGUACCAUGCUGGUAGCCAGUGUAAUACAAAGCCUUGCUGGCUACUAGUGUUGUACCUCAUUGGCUGCUCAGUCUAAAUCUAAACAUCA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AAAGCUCUCCAUCUCUG--| A UAU C UAAUAC
GAGUA CCAGU GUAC AUGCUGGUAGCCAGUG \
CUCGU GGUUA CAUG UGUGAUCAUCGGUCGU A
ACUACAAAUCUAAAUCUGA^ C CUC U UCCGAA
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
|---|
| Mature sequence |
Cpi-Mir-7147_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UGUACCAUGCUGGUAGCCAGUG -22
Get sequence
|
|---|
| Star sequence |
Cpi-Mir-7147_3p* |
| mirBase accession | None |
|---|
| Sequence |
37- CUGGCUACUAGUGUUGUACCUC -59
Get sequence
|
|---|
