| MirGeneDB ID | Dre-Mir-7147 |
|---|
| Family name |
MIR-7147 (all species) |
|---|
| Seed |
GUACCAU |
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| Species |
Zebrafish (Danio rerio) |
|---|
| MiRBase ID |
dre-mir-7147
|
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| Paralogues |
|
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| Orthologues |
Cpi-Mir-7147
Lch-Mir-7147
Loc-Mir-7147
Mal-Mir-7147
Tni-Mir-7147
Xla-Mir-7147-P1
Xla-Mir-7147-P2
Xtr-Mir-7147
|
|---|
| Node of Origin (locus) |
Osteichthyes
|
|---|
| Node of Origin (family) |
Osteichthyes
|
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Genome context
(danRer11) |
chr24: 10948075-10948132 [-]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
AGGGAGAGUGUGAGAGGGAGUGCCCAGUGCUGUACCAUGCUGGUAGCCAGUAUGAAAUAGGGCUUGCUGGUAACCAGCGUUGUGCCCCACUGGUUGCUCAGAAAAAAAGUUGACUUUA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AGGGAGAGUGUGAGAGG--| GC CU C A UGAAA
GAGU CCAGUG GUAC AUGCUGGU GCCAGUA U
CUCG GGUCAC CGUG UGCGACCA UGGUCGU A
AUUUCAGUUGAAAAAAAGA^ UU CC U A UCGGG
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
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Tissue expression
|
| Br |
Br |
Em |
Ey |
Gu |
Gu |
He |
Li |
Li |
Ov |
Te |
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| Mature sequence |
Dre-Mir-7147_5p |
| mirBase accession | MIMAT0028205 |
|---|
| Sequence |
0- UGUACCAUGCUGGUAGCCAGUA -22
Get sequence
|
|---|
| Star sequence |
Dre-Mir-7147_3p* |
| mirBase accession | None |
|---|
| Sequence |
36- CUGGUAACCAGCGUUGUGCCCC -58
Get sequence
|
|---|
