| MirGeneDB ID | Xla-Mir-7147-P2 |
|---|
| Family name |
MIR-7147 (all species) |
|---|
| Seed |
GUACCAU |
|---|
| Species |
African clawed frog (Xenopus laevis) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
Xla-Mir-7147-P1
|
|---|
| Orthologues |
Cpi-Mir-7147
Dre-Mir-7147
Lch-Mir-7147
Loc-Mir-7147
Mal-Mir-7147
Tni-Mir-7147
Xtr-Mir-7147
|
|---|
| Node of Origin (locus) |
X. laevis
|
|---|
| Node of Origin (family) |
Osteichthyes
|
|---|
Genome context
(GCF_001663975.1_XLA_v2) |
NC_030735.1: 119616897-119616955 [-]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
AGGGAAUUUCUGUGUGGGAGCUGUCAGUGCUGUACCAUGCUGGUAACCAGUGUAAUGAAAGUUGCUCCUGGCCACCAGUGUUGUGCUACCCUGGCUGCUCAGUGUGUUUGUCUCUUAGU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AGGGAAUUUCUGUGUGG--| U UGCU C AA UGUAAUGA
GAGC GUCAG GUAC AUGCUGGU CCAG \
CUCG CGGUC CGUG UGUGACCA GGUC A
UGAUUCUCUGUUUGUGUGA^ U CCAU U CC CUCGUUGA
110 100 90 80 70 60 |
|---|
| Deep sequencing |
|
|---|
| 3' NTU |
Unknown
|
|---|
| Motifs | No |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Xla-Mir-7147-P2_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UGUACCAUGCUGGUAACCAGUG -22
Get sequence
|
|---|
| Star sequence |
Xla-Mir-7147-P2_3p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
37- CUGGCCACCAGUGUUGUGCUAC -59
Get sequence
|
|---|
