| MirGeneDB ID | Dno-Mir-590 |
|---|
| Family name |
MIR-590 (all species) |
|---|
| Seed |
AAUUUUA |
|---|
| Species |
Nine-banded armadillo (Dasypus novemcinctus) |
|---|
| MiRBase ID |
dno-mir-590
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Bta-Mir-590
Cfa-Mir-590
Hsa-Mir-590
Mml-Mir-590
Oan-Mir-590
Ocu-Mir-590
|
|---|
| Node of Origin (locus) |
Mammalia
|
|---|
| Node of Origin (family) |
Mammalia
|
|---|
Genome context
(dasNov3) |
JH568462: 169015-169075 [-]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
UUCCUAAAAGUCCCAUAGCCAAUCCGAAAUGAGCGUAUUCAUAAAAUUACAGUAUAAUCCAGCUAGCCUGUAAUUUUAUGUAUAAACUAGUCUCUGAUUGAAACAUGCAACAAAUGUCUUC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UUCCUAAAAGUCCCAUAGC--| C A G CG U UAUAAUC
CAAUC GA AU AG UAU CAUAAAAUUACAG \
GUUAG CU UG UC AUA GUAUUUUAAUGUC C
CUUCUGUAAACAACGUACAAA^ U C A AA U CGAUCGA
. 110 100 90 80 70 |
|---|
| Deep sequencing |
|
|---|
| 3' NTU |
Unknown
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Dno-Mir-590_5p* (predicted) |
| mirBase accession | MIMAT0047982 |
|---|
| Sequence |
0- GAGCGUAUUCAUAAAAUUACAG -22
Get sequence
|
|---|
| Mature sequence |
Dno-Mir-590_3p (predicted) |
| mirBase accession | MIMAT0047983 |
|---|
| Sequence |
40- UAAUUUUAUGUAUAAACUAGU -61
Get sequence
|
|---|
