| MirGeneDB ID | Oan-Mir-590 |
|---|
| Family name |
MIR-590 (all species) |
|---|
| Seed |
ACUUUUA |
|---|
| Species |
Platypus (Ornithorhynchus anatinus) |
|---|
| MiRBase ID |
oan-mir-590
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Bta-Mir-590
Cfa-Mir-590
Dno-Mir-590
Eca-Mir-590
Hsa-Mir-590
Mml-Mir-590
Mmr-Mir-590
Ocu-Mir-590
Pab-Mir-590
|
|---|
| Node of Origin (locus) |
Mammalia
|
|---|
| Node of Origin (family) |
Mammalia
|
|---|
Genome context
(mOrnAna1.p.v1_plustraces) |
NC_041744.1: 959305-959364 [-]
|
|---|
Precursor
(pre-Mir +30nt flank) |
UUUAGAAACAAGCCUAAGCCAAUCAGAAAUGAGCUUAUCCAUAAAAGUACAGUAUCGUCAGUAAACCUGUACUUUUAUGGAUAAGCUAGUCUCUGAUUGAAACACGCAACAAGUCUCCUC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UUUAGAAACAAGCCUAAGC--| A G UAUCGU
CAAUCAGA AU AGCUUAUCCAUAAAAGUACAG C
GUUAGUCU UG UCGAAUAGGUAUUUUCAUGUC A
CUCCUCUGAACAACGCACAAA^ C A CAAAUG
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Oan-Mir-590_5p* |
| mirBase accession | MIMAT0007096 |
|---|
| Sequence |
0- GAGCUUAUCCAUAAAAGUACAG -22
Get sequence
|
|---|
| Mature sequence |
Oan-Mir-590_3p |
| mirBase accession | MIMAT0007097 |
|---|
| Sequence |
39- UACUUUUAUGGAUAAGCUAGU -60
Get sequence
|
|---|
