MirGeneDB 3.0
MirGeneDB ID

Eca-Mir-590

Family name MIR-590 (all species)
Seed AAUUUUA
Species Horse (Equus caballus)
MiRBase ID eca-mir-590
Paralogues
Orthologues Bta-Mir-590  Cfa-Mir-590  Dno-Mir-590  Hsa-Mir-590  Mml-Mir-590  Mmr-Mir-590  Oan-Mir-590  Ocu-Mir-590  Pab-Mir-590 
Node of Origin (locus) Mammalia
Node of Origin (family) Mammalia
Genome context
(GCA_002863925.1_EquCab3.0)		 CM009160.1: 12015292-12015352 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUCCUAAAACUCCUAUAGCCAAUCAGAAACGAGCUUAUUCAUAAAAGUACAGUAUAAUCCAGUAAACCUGUAAUUUUAUGUAUAAGCUAGUCUCUGAUUGAAACAUGCAACAAAUGUCUUU
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Structure
        10          20        30        40        50          
UUCCUAAAACUCCUAUAGC--|       A  G       U       G    GUAUAAUC 
                     CAAUCAGA AC AGCUUAU CAUAAAA UACA        \
                     GUUAGUCU UG UCGAAUA GUAUUUU AUGU        C
UUUCUGUAAACAACGUACAAA^       C  A       U       A    CCAAAUGA 
 .       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er
Star sequence

Eca-Mir-590_5p*
mirBase accessionMIMAT0013058
Sequence 
0- GAGCUUAUUCAUAAAAGUACA -21
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Mature sequence

Eca-Mir-590_3p
mirBase accessionMIMAT0013059
Sequence 
40- UAAUUUUAUGUAUAAGCUAGU -61
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