MirGeneDB 3.0

MirGeneDB ID

Hsa-Mir-590

Family name MIR-590 (all species)
Seed AAUUUUA
Species Human (Homo sapiens)
MiRBase ID hsa-mir-590
Paralogues
Orthologues Bta-Mir-590  Cfa-Mir-590  Dno-Mir-590  Eca-Mir-590  Mml-Mir-590  Mmr-Mir-590  Oan-Mir-590  Ocu-Mir-590  Pab-Mir-590 
Node of Origin (locus) Mammalia
Node of Origin (family) Mammalia
Genome context
(hg38)
chr7: 74191213-74191273 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUCUUAAAAGUCCUGUAGCCAGUCAGAAAUGAGCUUAUUCAUAAAAGUGCAGUAUGGUGAAGUCAAUCUGUAAUUUUAUGUAUAAGCUAGUCUCUGAUUGAAACAUGCAGCAGCUGUCUUC
Get precursor sequence
Structure
        10          20        30        40        50          
UUCUUAAAAGUCCUGUAGC--|       A  G       U       G     UAUGGUG 
                     CAGUCAGA AU AGCUUAU CAUAAAA UGCAG       \
                     GUUAGUCU UG UCGAAUA GUAUUUU AUGUC       A
CUUCUGUCGACGACGUACAAA^       C  A       U       A     UAACUGA 
 .       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Dc Dc Dr Dr Xp Xp Bl Br Br Ce Ce Co Fo He Ki Le Li Li Lu Pa Pl Pl Sk Sk Sk Sm Sp Sp St Te Th Ut
Star sequence

Hsa-Mir-590_5p*

mirBase accessionMIMAT0003258
Sequence
0- GAGCUUAUUCAUAAAAGUGCAG -22
Get sequence
Proposed targets microrna.org: MIMAT0003258
TargetScanVert: hsa-miR-590-5p
TargetMiner: hsa-miR-590-5p
miRDB: MIMAT0003258
Mature sequence

Hsa-Mir-590_3p

mirBase accessionMIMAT0004801
Sequence
40- UAAUUUUAUGUAUAAGCUAGU -61
Get sequence
Proposed targets microrna.org: MIMAT0004801
TargetScanVert: hsa-miR-590-3p
TargetMiner: hsa-miR-590-3p
miRDB: MIMAT0004801