MirGeneDB 3.0
MirGeneDB ID

Ebu-Mir-10-P3f

Family name MIR-10 (all species)
Seed CCCUGAG
Species Inshore hagfish (Eptatretus burgeri)
MiRBase ID
Paralogues Ebu-Mir-10-P1e  Ebu-Mir-10-P1f  Ebu-Mir-10-P2e  Ebu-Mir-10-P2f  Ebu-Mir-10-P3e 
Orthologues Aae-Mir-10-P3  Adi-Mir-10  Aga-Mir-10-P3  Agr-Mir-10-P3  Asp-Mir-10  Asu-Mir-10-P3  Bfl-Mir-10-P3  Bge-Mir-10-P3  Bko-Mir-10-P3  Bla-Mir-10-P3  Bpl-Mir-10-P3  Cin-Mir-10-P3  Cte-Mir-10-P3  Dan-Mir-10-P3  Dlo-Mir-10-P3  Dma-Mir-10-P3  Dme-Mir-10-P3  Dmo-Mir-10-P3  Dpu-Mir-10-P3  Dsi-Mir-10-P3  Dya-Mir-10-P3  Eba-Mir-10-P3  Egr-Mir-10-P3  Esc-Mir-10-P3  Gpa-Mir-10-P3  Gsa-Mir-10-P3  Gsp-Mir-10-P3  Hru-Mir-10-P3  Isc-Mir-10-P3  Lan-Mir-10-P3  Lgi-Mir-10-P3  Lhy-Mir-10-P3  Llo-Mir-10-P3  Mgi-Mir-10-P3  Mom-Mir-10-P3  Nag-Mir-10-P3-v1  Nag-Mir-10-P3-v2  Nve-Mir-10  Obi-Mir-10-P3  Ofu-Mir-10-P3  Ovu-Mir-10-P3  Pau-Mir-10-P3  Pca-Mir-10-P3  Pcr-Mir-10-P3  Pdu-Mir-10-P3  Ple-Mir-10-P3  Pmi-Mir-10-P3  Pve-Mir-10-P3  Rph-Mir-10-P3  Sko-Mir-10-P3  Snu-Mir-10-P3  Spu-Mir-10-P3  Tca-Mir-10-P3  War-Mir-10-P3  Xbo-Mir-10-P3 
Node of Origin (locus) E. burgeri
Node of Origin (family) Eumetazoa
Genome context
(Eburgeri_3)		 FYBX02010565.1: 1843228-1843293 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGUAUCACAACAGGCUAGUGCUCCAUGCGUUCCCUGAGACCCUAACUCGUGAGAGGUCAGGUUGCUUGUUGACCACGAGCUGGGGUCGCAGGAAGCGUGCGAGGCACUCUGAUGAAAGCCUCAGUC
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Structure
        10          20          30        40        50        60  
AGUAUCACAACAGGCUA--   -   -|    GUUC    A       A      AGAGGUCAGG 
                   GUG CUC CAUGC    CCUG GACCCUA CUCGUG          U
                   CAC GAG GUGCG    GGAC CUGGGGU GAGCAC          U
CUGACUCCGAAAGUAGUCU   G   C^    AA--    G       C      CAGUUGUUCG 
    120       110       100          90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
To
Mature sequence

Ebu-Mir-10-P3f_5p
mirBase accessionNone
Sequence 
0- UCCCUGAGACCCUAACUCGUGA -22
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Star sequence

Ebu-Mir-10-P3f_3p*
mirBase accessionNone
Sequence 
44- ACGAGCUGGGGUCGCAGGAAGC -66
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